| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1018 |
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| Symbol | |
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| ID | 4603270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1232782 |
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| End bp | 1233888 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780357 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_926895 |
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| Protein GI | 119774155 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.183635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTAC ACAGTATCGA AGAAATCATC GAAGACATTC GTCAGGGCAA AATGGTGATC
CTGATGGACG ATGAAGACAG GGAAAACGAA GGCGACCTCA TCATGGCCGC CGAACTGGTG
ACCCCGGAAG CCATTAACTT TATGGCCACC TATGGCCGTG GTCTGATTTG TCAGACCATG
ACCCGTGCCC GCTGCCAGCA GCTCAATCTG CCATTGATGG TCAGTCACAA CAACGCCCAG
TTCACCACCA ACTTTACCGT GTCCATCGAG GCCGCCCAGG GGGTGACCAC CGGGATTAGC
GCCCACGACC GCGCCGTGAC CATTCAGGCC GCGGTTGCCA AGAATGCCAA GGCTTCTGAC
CTGGTACAGC CCGGCCACAT TTTCCCGCTG ATGGCTCAGG AAGGTGGCGT GCTGACACGT
GCCGGCCATA CCGAAGCTGG ATGTGACCTG GCGCGGCTGG CAGGCTTAGA GCCCTCCGGT
GTGATTGTGG AAATCCTCAA CGAAGACGGC ACCATGGCCC GTCGTCCGGA TCTGGAAAAA
TTCTCCGAGA AACACGGTAT CAAGATTGGC ACCATTGCCG ATTTGATTGA ATACCGCAAC
AACACTGAAA CCACCGTGGT GCGGGAGGCG AGCTGTAAAC TGCCGACCCG TTTCGGTGAG
TTTATGATGC ACACCTTCCG CGACACCATC GACAACCAGT TGCACTATGC ACTGGTGAAA
GGTGACGTTA ATGACAATGT GCTGGTGCGG GTGCACCTGA CCAACACCTT CAACGATATC
CTGCATTCAG AGCGGGATCA GGAACGTTCC TGGCCATTAG AGAAGGCCAT GGCCCGTATC
GGCAGCGAAG GTGGCGTGCT GGTTATCCTT GGTAACCACG AACATGACAG TGATATTCTG
GCCAAGGTTA AAGCCTTTGA AGCCGAAGAT CAGGGCCAGG CCGCAGCGCC TGCCAAGTGG
CAGGGGACTT CACGCCGCGT GGGTGTGGGT TCTCAAATTC TGGCCTCCCT GGGGGTTCAC
AAGATGCGCC TCCTGAGTTC ACCCAAGAAG TACCACTCAC TGTCGGGCTT TGGTCTGGAA
GTGACCGAGT ACGTCTCAGG CGAGTAA
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| Protein sequence | MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLIMAAELV TPEAINFMAT YGRGLICQTM
TRARCQQLNL PLMVSHNNAQ FTTNFTVSIE AAQGVTTGIS AHDRAVTIQA AVAKNAKASD
LVQPGHIFPL MAQEGGVLTR AGHTEAGCDL ARLAGLEPSG VIVEILNEDG TMARRPDLEK
FSEKHGIKIG TIADLIEYRN NTETTVVREA SCKLPTRFGE FMMHTFRDTI DNQLHYALVK
GDVNDNVLVR VHLTNTFNDI LHSERDQERS WPLEKAMARI GSEGGVLVIL GNHEHDSDIL
AKVKAFEAED QGQAAAPAKW QGTSRRVGVG SQILASLGVH KMRLLSSPKK YHSLSGFGLE
VTEYVSGE
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