| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0975 |
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| Symbol | |
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| ID | 4603227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1179009 |
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| End bp | 1180232 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780314 |
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| Product | phosphopentomutase |
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| Protein accession | YP_926852 |
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| Protein GI | 119774112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.515828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00460474 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGTA CCATTATTTT GATGCTGGAC TCCTTCGGCA TCGGTGCTGC CGATGATGCA
GACAAGTTCG GCGACGTGGG GTCAGACACC TTTGGTCACA TTGCACAAAT GTGCGCTGAG
GGTAAGGCCA ACAACGGCCG TGAAGGCGAA CTCAAGCTGC CAAACTTAAG CCGTCTGGGC
CTGGCCCATG CTGCCAAAGA AGCGACAGGT GCATTTGCCC CTGGATTTGG CGACAACGTT
GATATCATTG GCGCTTACGG TCACTGTCAG GAGCTGAGCT CAGGTAAAGA CACGCCCAGT
GGTCACTGGG AAATGGCCGG TGTGCCCGTG CTGTTTGAGT GGGGCTATTT CAGCGAGCAT
CAGAATTCTT TCCCGAAAGA ACTGACCGAC AAAATTCTTG AGCGCGCTGG CTTGACCGAG
TTTTTGGGTA ATTGCCACGC CTCTGGTACC ACCATTCTGG AAGAGCTCGG CGAAGAGCAT
ATGAAAACCG GAAAGCCGAT TTTCTACACC TCCGCCGACA GCGTGTTTCA GATTGCCTGC
CATGAAGAAA GCTTCGGGCT TGAGAACCTC TACCGCCTGT GTGAAATCGC CCGGGAAGAG
CTGGAGCCAT ACAACATCGG CCGTGTTATT GCCCGTCCCT TTGTCGGCAC AGGTCCAAGT
GACTTTGCCC GTACCGGCAA CCGTCGCGAT TATGCGGTTG AGCCACCATC AAAAACCGTG
CTGGATAAGC TCAAACAAGC CGGTGGTGAA GTGGTGAGTG TGGGTAAGAT TTCTGACATC
TACGCCCACT GCGGTATCAC CAAAAAGGTG AAGGCATCAG GACTTGAAGA TTTGTTCGAT
GCCACACTGG AGCAAATCAA GCAGGCCGGT GACAACACCA TAGTGTTCAC CAACTTTGTG
GATTTTGACT CCCACTACGG TCATCGCCGC GACGTGTCTG GTTATGCCAA GGCACTGGAA
TACTTCGACG CCCGTCTGCC TGAGCTGATG GCGCTGCTGG AAGAAGGCGA TTTGCTGCTG
CTCACTGCCG ATCACGGCTG CGACCCAACC TGGCAGGGCA CCGACCATAC CCGTGAATTC
GTGCCTGTAT TGGCTTATGG TGCCGGCCTT GAGGCAGGCT CACTGGGCAA GCGCGGCAGC
TTTGCGGATA TTGGTCAGTC GATTGCCAGC TACTTCGGGT TGGCGGCAAT GGAATATGGC
GAGTCATTCA TGCCGGCCCG CTAA
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| Protein sequence | MKRTIILMLD SFGIGAADDA DKFGDVGSDT FGHIAQMCAE GKANNGREGE LKLPNLSRLG
LAHAAKEATG AFAPGFGDNV DIIGAYGHCQ ELSSGKDTPS GHWEMAGVPV LFEWGYFSEH
QNSFPKELTD KILERAGLTE FLGNCHASGT TILEELGEEH MKTGKPIFYT SADSVFQIAC
HEESFGLENL YRLCEIAREE LEPYNIGRVI ARPFVGTGPS DFARTGNRRD YAVEPPSKTV
LDKLKQAGGE VVSVGKISDI YAHCGITKKV KASGLEDLFD ATLEQIKQAG DNTIVFTNFV
DFDSHYGHRR DVSGYAKALE YFDARLPELM ALLEEGDLLL LTADHGCDPT WQGTDHTREF
VPVLAYGAGL EAGSLGKRGS FADIGQSIAS YFGLAAMEYG ESFMPAR
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