| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0973 |
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| Symbol | |
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| ID | 4603225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1176746 |
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| End bp | 1177519 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780312 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_926850 |
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| Protein GI | 119774110 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase
[TIGR00148] UbiD family decarboxylases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.048409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000997229 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATC TTAAAAAAGC AGCCCAGCGT GCCATTGAGT TGATGGACCT CACTACGCTG
AACGACGACG ATACCGCTGA AAAAGTGATT GAGCTTTGCA AAAAAGCCGT TACTCCAGCT
GGTCACACCG CCGCTATCTG CATCTATCCC CGTTTTATTC CCATCGCCCG CAAGACTCTG
ATTGAACTCG ATGCCGAAGA CATCCAAATC GCCACTGTGA CCAACTTCCC TCACGGTAAC
GACGATATCG CGATTGCTGT GCTCGAAACC CGCGCGGCCG TTGCGTACGG TGCTGATGAA
GTGGACGTGG TTTTCCCATA CCGCGCCCTG ATGGAAGGCG ATGAAACCGT GGGCTTTGAG
CTGGTTAAAG CTTGTAAAGA AGCCTGTGGT GACGATGTGC TTCTTAAAGT CATCATCGAG
TCCGGTGAAC TGAAAGATCC AGCCCTTATC CGCAAGGCCT CTGAAATTTC TATCGATGCC
GGTGCTGATT TCATCAAGAC CTCCACCGGT AAGGTCCCAG TTAACGCCAC TTTGGAAGCC
GCTGAAATCA TGCTGACCGT GATTGCCGAA AAGAACCGTG CTGTAGGCTT CAAGCCAGCC
GGTGGCGTGC GTGATGCCGC TGCGGCTGCC GAGTTCCTGG GGACTGCGGC TCGCATCCTT
GGTGAAGACT GGGTGACCCC ACGAACCTTC CGTTTCGGTG CTTCCAGCCT GCTGTCCAGC
TTGCTGCATA CACTGGAACT GGCCGATGCG CCTAAAGGTG CCCAGGGCTA CTGA
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| Protein sequence | MSDLKKAAQR AIELMDLTTL NDDDTAEKVI ELCKKAVTPA GHTAAICIYP RFIPIARKTL
IELDAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGDETVGFE
LVKACKEACG DDVLLKVIIE SGELKDPALI RKASEISIDA GADFIKTSTG KVPVNATLEA
AEIMLTVIAE KNRAVGFKPA GGVRDAAAAA EFLGTAARIL GEDWVTPRTF RFGASSLLSS
LLHTLELADA PKGAQGY
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