Gene Sama_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0959 
Symbol 
ID4605937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1159104 
End bp1159559 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content50% 
IMG OID639780298 
Producthypothetical protein 
Protein accessionYP_926836 
Protein GI119774096 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0670206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGACAT TGGAAACCAG ACTGGCAGAA ATGCTGACAC CGGCTGTCGA AGCCGCTGGC 
TATGTGGTGT GGGGCATTGA ATACGTGCAG GCAGGAAAGC ATTCAATCCT GCGTGTTTAT
ATCGACAGCG AGCAGGGTAT TTCCGTTGAC GACTGTGCTG ATGCCAGTCG CCAAATCAGT
GCAATCCTCG ATGTGGAAGA CCCAATTTCC AACGAATACA CTCTCGAAGT GTCTTCTCCT
GGGCTGGACA GACCGCTGTT CAACGCAGCC CAATACGCCC GCTATGTGGG TGAAGATGTA
AAAGTACAAC TGACCATGCC TGTTGAAGGC AGTCGGAACT TGAAAGGTGT TATCGACAAG
GTTGAAGGCC AGATGCTGAC CATCAAAGTC GATGGCAAGA CATTGGTCGT TGCCCTGGAC
AATATCCGCA AAGGCAACAT TATTGCGAAG TTTTGA
 
Protein sequence
MATLETRLAE MLTPAVEAAG YVVWGIEYVQ AGKHSILRVY IDSEQGISVD DCADASRQIS 
AILDVEDPIS NEYTLEVSSP GLDRPLFNAA QYARYVGEDV KVQLTMPVEG SRNLKGVIDK
VEGQMLTIKV DGKTLVVALD NIRKGNIIAK F