Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0955 |
Symbol | |
ID | 4603207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1155159 |
End bp | 1155998 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780292 |
Product | dihydropteroate synthase |
Protein accession | YP_926832 |
Protein GI | 119774092 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0212772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.281578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTACGC TAACTGCCAG AGAGAAAACC CTCGACCTGA GCCGCCCCGT GGTGATGGGG ATTTTGAATG TGACTCCGGA TTCATTTTCC GACGGAGGCC AATTCGCCGC TTTTGAACGT GCCTGTGAAC ATGCTGACCA GTTGGTAACA GAAGGCGCGG CCATCATCGA CATCGGTGGC GAGTCTACCC GCCCCGGCGC TGCCGAGGTA TCGCTGGATG AAGAGATCAG CCGCGTCATC CCGCTGGTAG AGTATGTCAG CAAGACACAT GATGTATGGG TGTCAGTGGA TACCAGTAAA GCCGGAGTGA TGAGTGAAGC CGCCAAGGCA GGTGCCCACT TAATCAATGA TGTGCGTGCG CTGATGGAGC CGGGAGCGCT TGAAGCAGCC GCGGTTTCGG GATTAGCCGT ATGCTTGATG CATATGCAGG GTCAGCCGCG CACCATGCAG CAAAATCCGG AATATGACAA TTTAATAGAA GATGTATGCA CGTTTTTTGA ACATCGTATT GCTGCCTGTG TTGACGCGGG GATCCCACGG GCGCAGATTA TCCTTGATCC CGGTTTTGGA TTCGGTAAAA CAGTTTCGCA CAACTATGAG CTGCTCGCCC GATTTGCAGA GTTTGAGCGA TTTGGTTTAC CGCTGCTGGC AGGCTTGTCC CGAAAGAGCA TGCTTGGCAA TTTGCTTGGC CGTGATGCAA CTTCGCGTCT TGCTGGCAGT CTTGCTGGTG CCTTATTGTC GGCGCAGCAG GGCGCAAACA TAATCAGGGT GCATGATGTC GCAGAGACGA TAGATGTCCT CAAGGTGCTT GAGGCCACCC GGGAATATAA ACACCTGTAA
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Protein sequence | MFTLTAREKT LDLSRPVVMG ILNVTPDSFS DGGQFAAFER ACEHADQLVT EGAAIIDIGG ESTRPGAAEV SLDEEISRVI PLVEYVSKTH DVWVSVDTSK AGVMSEAAKA GAHLINDVRA LMEPGALEAA AVSGLAVCLM HMQGQPRTMQ QNPEYDNLIE DVCTFFEHRI AACVDAGIPR AQIILDPGFG FGKTVSHNYE LLARFAEFER FGLPLLAGLS RKSMLGNLLG RDATSRLAGS LAGALLSAQQ GANIIRVHDV AETIDVLKVL EATREYKHL
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