| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0948 |
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| Symbol | |
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| ID | 4603200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1148200 |
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| End bp | 1149525 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780283 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_926825 |
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| Protein GI | 119774085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000625246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.50538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA CAGTTGCGAG CGAGGCTCAG GTGAGCCGCA GAAGCAGCGT ACTGCCGATG
ACCATTATCG GCATACTCTT CTTCATCTTT GGATTTGTGA CCTGGCTGAA TGGTTCACTG
ATCCCTTTTC TGAAGGTTAT CTGTGAGCTG AACGAGTTTC AGGCACTGTT TGTCACTTTT
GCCTTCTACA TAGCCTACAC GGTAATGGCC TTGCCTATGT CCTCCATTCT ACGCCGTACC
GGTTACCGTA ATGGTATGGC CATTGGTTTG GGCATCATGG TGGTGGGTAG CCTGGCTTTT
ATTCCAGCCG CATACAGCGC CAACTTCCTG CTGTTTTTGG GTGCCCTGTT TATTCTGGGA
ACGGGTTTGA CCATTCTGCA AACGGCATCC AACCCTTACG TGGTTCATAT CGGTCCCAAA
GAAAGTGCGG CCATGCGGAT CTCCATCATG GGAATTATCA ACAAGCTCGC TGGTGTAGTG
GTTCCGCTGC TGTTTACTGC GTTGGTGTTG TCGGGGCTTG AAAACTTCGA TGAAGCTCAC
CTGTCGGCAT TGAGCGACGC AGACCGAGCG GTGCAGATAA CCGAGCTCTC AAGCCGCCTG
GTGATGCCTT ATATCTATAT GGCCGTGGCG CTGCTTGCGC TGATCGCGCT GGTGAAGTTC
TCTGGTCTAC CAGAACTTGA ATTTGAAGAA GCCGAATCCG CCGAAGGCGA GAAGGGCAGT
ATCACCCAGT TTCCTCAGGT TATTCTGGGC GCCATAGCAC TCTTTGCTTA TGTGGGTATC
GAGGTGATTG CCGGCGATAC CATTGGTCTG TACGGTCAGT CGCTTGGGGT GGCCAATTTC
GCGTCGCTTA CTTCATACAC CATGGTATTT ATGGTGATTG GTTATGCCAT AGGTGTGCTC
TGTATTCCGC GTTTTATCAG TCAGGAAAGG GCGTTGCTTG CCTCCGCCAT TGCTGGTGGT
CTGTGTGTGC TTGGTGCTGT ATTTGGTTCT ACCGAAAGCA CCACACTGGC CTCAGCCCTC
TGGGGATGGA TGGGGGTGCC TTTGGTCCCC AACTCGGTAG TTTTTGTTGC CATGATGGGC
CTAGCCCACG CGCTGGTGTG GCCTGCCGTT TGGCCTTTGG CATTGGATGG CTTGGGCAAG
TTTACCGCCC AGGGTTCGGC GTTGCTTATC ATGGGGATTT CCGGTGGCGC CATTTTGCCC
CTGCTCTTTG GCAAGGTGGC CCATTTCAGC GGTGAGACTC AGCTGGGTTA CTGGGTAGGC
CTGCCATGCT ATCTGTTCAT CCTCTTCTAT GCGGTGAAAG GACATAAGAT GCGTAGCTGG
AAATAA
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| Protein sequence | MNMTVASEAQ VSRRSSVLPM TIIGILFFIF GFVTWLNGSL IPFLKVICEL NEFQALFVTF
AFYIAYTVMA LPMSSILRRT GYRNGMAIGL GIMVVGSLAF IPAAYSANFL LFLGALFILG
TGLTILQTAS NPYVVHIGPK ESAAMRISIM GIINKLAGVV VPLLFTALVL SGLENFDEAH
LSALSDADRA VQITELSSRL VMPYIYMAVA LLALIALVKF SGLPELEFEE AESAEGEKGS
ITQFPQVILG AIALFAYVGI EVIAGDTIGL YGQSLGVANF ASLTSYTMVF MVIGYAIGVL
CIPRFISQER ALLASAIAGG LCVLGAVFGS TESTTLASAL WGWMGVPLVP NSVVFVAMMG
LAHALVWPAV WPLALDGLGK FTAQGSALLI MGISGGAILP LLFGKVAHFS GETQLGYWVG
LPCYLFILFY AVKGHKMRSW K
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