Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0941 |
Symbol | |
ID | 4603193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1138366 |
End bp | 1139229 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780276 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_926818 |
Protein GI | 119774078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00121158 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACAA GGTCTTGGTT TTACGCACTG TTTTTTTCGG CTTCCTTTGC TGGCGCTTTG CCGTGCCAAG CGGCCGACGC ATCGCTTATC ACTACCATAC CCAACAGCTG GCAATTCACC CTGCTTACTG AGGCGCTCAA GCGCTCGGGC ACCAACTATC AGATATCCCA ACTAAGCTCA GAGATGAACC AAAAGCGCAA AGTTGAAGAG GCGCTTGAGG GCAACATTGA TGTCTTTTGG AGCATGACCT CAGCCGAACT CGAACGCACC GTTTTACCCA TCAGGGTGCC CTTGTTCAAA GGGCTGCTGG GTAACCGGTT GCTTATCATC CGTGAAGCGG ATCAGGGCCG TTTTGCCAAG GTTAAAAGCA AACAGGATTT CAGTGCTTTT CGAGCAGGTC AAAACCGTTA CTGGCCCGAC GCTACCATTA TCGAATCCAA TGGTTTGCCG CTGATTACCA GTTACAAGTA CAAAAACCTT TACCCCATGC TCGAAGGCGG TCGTTTCGAT TATCTGGCGC TGGGCGCTCA GGAAATCTGG GATGAGTTGG CCAAACATCC TGATCCGGCT CTGAAAGTCG ATAGCCACGT CTTATTGCAA TACCGCAGTC CTGCGTACTT CTTTGTCTCC CCCAAACGTC AGGCGCTGGC AGAAGATCTA AACCGTGGTC TAGAGGCCAT GATTGCCGAT GGCAGTTTCG ATCGCATGTT CAATCAAGAG CTTAAAATCG ATGAGCTTTA TCGTATAGCC AAGTTCAATG AACGGGTCAT CATCCGCTTG AATACGTCGG ATTTGAGCCC ACAGACGCCG GTACACCGGC CTGAGTTATG GCTCGATCTG TTCAGTATGG AGGGGGTGAA ATGA
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Protein sequence | MRTRSWFYAL FFSASFAGAL PCQAADASLI TTIPNSWQFT LLTEALKRSG TNYQISQLSS EMNQKRKVEE ALEGNIDVFW SMTSAELERT VLPIRVPLFK GLLGNRLLII READQGRFAK VKSKQDFSAF RAGQNRYWPD ATIIESNGLP LITSYKYKNL YPMLEGGRFD YLALGAQEIW DELAKHPDPA LKVDSHVLLQ YRSPAYFFVS PKRQALAEDL NRGLEAMIAD GSFDRMFNQE LKIDELYRIA KFNERVIIRL NTSDLSPQTP VHRPELWLDL FSMEGVK
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