| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0923 |
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| Symbol | |
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| ID | 4603175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1115436 |
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| End bp | 1116371 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780258 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_926800 |
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| Protein GI | 119774060 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0290766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAA TCCGCGGAAT TCACAATATC TTGCCCGCCC ATCGGGGATG TGTGCTAACC
ATAGGCAACT TTGATGGTGT CCATCGTGGG CACGCCAAAG TGATTGCCAG TCTGGTTGAG
CGGGCCAAGC ACTTTGGCCT GCCCGCGACC CTGATGACCT TTGAGCCCCA GCCTCAGGAG
TTGTTTCGTG GTGATGATGC CCCGGCGCGA TTGAGTTTGC TGCGGGATAA AATAGTGCTG
CTGGACGAGC TGGGAATTGA CCGCCTGCTT TGCGTCAACT TCAACCGCAA GTTTGCCTCC
ATGGATCCCG AGCACTTTAT CGAAGATCTG CTGGTTAAAA AACTTGGGGT GAAGTATCTG
GTGGTCGGTG ATGATTTTTG CTTCGGTAAA AGCCGTGCCG GTAACTTCGA TATGCTGAAA
AAGGCCGGTG AACGTTTCGG CTTTGCCGTG GTCAACACCC ACTCTTTTAT GGTGGGTGAC
CTGAGGGTGA GCTCTACCGC GGTGCGTGAG CAGCTCGCCA AAGGTAATTT GGAGCAGGCG
AGGCGCTTGC TTGGCCATCC CTTTACTCTT TGTGGCCGGG TGGCCCATGG ACAAAAGATT
GGCCGGACGA TTGGCTTTCC CACCGCCAAT ATTGCACTTA AACGTAAGGT GGTGCCGGTG
CGCGGCGTCT TCGCTGTGAA ACTCTGGTGG GATGACAGTG ATATATATGA AGGGGTTGCC
AATGTGGGGT TCAGGCCCAC AGTGAACGGA CAGGTGTGCC AACTGGAGGT ACATCTGTTT
GATTTTGAAG GTGACCTCTA TGGCAAGCGG GTGGAGGTGG AGCTGGTGGC GAAAATTCGC
GACGAGCAAC CCTTTGAATC CCTCGATGCC CTGAAAAAAC AGATTTGGAA CGACGCCGAC
AGAGCCCGGG CTCTGCTTGG TGACGATGCA GGTTAA
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| Protein sequence | MELIRGIHNI LPAHRGCVLT IGNFDGVHRG HAKVIASLVE RAKHFGLPAT LMTFEPQPQE
LFRGDDAPAR LSLLRDKIVL LDELGIDRLL CVNFNRKFAS MDPEHFIEDL LVKKLGVKYL
VVGDDFCFGK SRAGNFDMLK KAGERFGFAV VNTHSFMVGD LRVSSTAVRE QLAKGNLEQA
RRLLGHPFTL CGRVAHGQKI GRTIGFPTAN IALKRKVVPV RGVFAVKLWW DDSDIYEGVA
NVGFRPTVNG QVCQLEVHLF DFEGDLYGKR VEVELVAKIR DEQPFESLDA LKKQIWNDAD
RARALLGDDA G
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