Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0907 |
Symbol | |
ID | 4603159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1095784 |
End bp | 1097070 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780242 |
Product | threonine synthase |
Protein accession | YP_926784 |
Protein GI | 119774044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTAT ACAATCTTAA GCATCCCGAT GAGCGGGTAA GCTTTTCTCA GGCGGTAAAG CTGGGACTGG GTAAAGACCG CGGGCTGTTT TTCCCGACTC ATATTCCCAA GCTGGATGAT GTTGAAACCC TGCTGACTTT ACCGTTTGCG CAGCGCAGTA AAAAAATACT GGGTGCCTGG CTCGCTGATG AGTTGGGGCA AAATGTGGTG GATGCCCTGG TCGATAAAGC ATTTACCTTT GAGGTGCCGC TGGTCAAGGT AGACGACACG CGTTATTGCC TGGAGCTTTT CCACGGCCCG ACTCTGGCAT TCAAAGACTT TGGTGCCCGC TTCATGGCCC AGTGCCTGAA CGTGCTTGCC GGTGATGAAC GGCTGACCAT TCTCACCGCC ACCTCAGGTG ATACTGGGGC TGCTGTGGCC GACGCCTTCT ATGGGCTCGA TAAGGTGCAG GTCTGCGTGC TTTATCCAAA AGGCAAAATC AGCCTGCTGC AGGAAAAGAT GTTTACTACC CTCGGCAACA ACATTCACAC GGTGGCGGTT GAATCCGATT TTGACGCCTG TCAGGCGCTG GTGAAACAGG CCTTTGATGA TGCCGACGTC CGTGAAGGAC TGCACCTTAA TTCGGCTAAC TCTATTAATA TCAGTCGGTT GCTGGCACAG ATCTGCTATT ACTTCGAGGC CGTGGCTCAG TATCGCAAGA ACTTTGTCGA TGCACCGGTT ATTGCCGTGC CCAGCGGCAA CTTCGGTAAT CTCACCGCTG GTTTCTTTGC CAAGGCCATG GGCCTGCCGG TGAAGCGTTT TGTGGCCGCC ACCAACAGCA ACGACACTGT GCCGCGTTAT CTCGCCAGCG CAAACTGGCA GGTCAATCCC ACAGTGGCCA CCATGTCCAA TGCCATGGAT GTGGCAGACC CCAGCAACTG GCCTCGTGTG GAAGCCATCG CCAAGGTCAT GGGGTGGTCC CTTGCTGAGA TTGATGGGGT AGCACTGGAC GAGCAACAAA CCCGTTGTGC TTTGCTGGCA TTGCAGGAAG ATGGCTACTT GTCCGAACCC CACGCGGCCA TTGCTGCACA AGCGCTTAAG GCCACACTAG GCAAGGACGA GCGGGGTATT TTTCTCGGTA CGGCTCATCC GGCGAAGTTC AAAGATGTGG TCGACCATGA GCTGTCTCTG GACTTGCCTT TACCCCCAGA GCTTGCGGCG GTTGCTGACA AGCCGGTTCT GTCGGCCAAT CTGGCGCCGG ATTTTGCCGC ACTCAAGACT CATTTGTTTG AAACCTTGCG TCATTGA
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Protein sequence | MELYNLKHPD ERVSFSQAVK LGLGKDRGLF FPTHIPKLDD VETLLTLPFA QRSKKILGAW LADELGQNVV DALVDKAFTF EVPLVKVDDT RYCLELFHGP TLAFKDFGAR FMAQCLNVLA GDERLTILTA TSGDTGAAVA DAFYGLDKVQ VCVLYPKGKI SLLQEKMFTT LGNNIHTVAV ESDFDACQAL VKQAFDDADV REGLHLNSAN SINISRLLAQ ICYYFEAVAQ YRKNFVDAPV IAVPSGNFGN LTAGFFAKAM GLPVKRFVAA TNSNDTVPRY LASANWQVNP TVATMSNAMD VADPSNWPRV EAIAKVMGWS LAEIDGVALD EQQTRCALLA LQEDGYLSEP HAAIAAQALK ATLGKDERGI FLGTAHPAKF KDVVDHELSL DLPLPPELAA VADKPVLSAN LAPDFAALKT HLFETLRH
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