| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0894 |
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| Symbol | tyrA |
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| ID | 4603146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1081419 |
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| End bp | 1082558 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780229 |
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| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
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| Protein accession | YP_926771 |
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| Protein GI | 119774031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.591266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAA AGACCACCGC TGAGCTGGAA AACCTACGGG GCCTGATTGA TGGTGTCGAC
AGCCAGTTAC TGTCGCTGCT TCGCAAGCGT CTTGATTTGG TGGCACAGGT TGGCACAGTC
AAACATGCGG CGGGACTGCC GATTTACGCG CCTGCACGGG AAGCGGCCAT GCTCGGTAAG
CGTCGCGCCG AAGCCGAAGC CATGGGAGTA AGTCCACAGC TGATTGAGGA TATCTTGAGA
CGCCTGATGC GCGAATCCTA CATGAGTGAA AAAGACGTGG GCTTCAAGCA GGTCAATCCT
GAGCTGGGCC ATATTGTTAT CATAGGTGGG CAAGGGCAGC TGGGACGCTT ATTCGCTCAG
ATGTTTGCGC TTTCCGGCTA TGAAGTGCGT CTCTTGGATA AAGATGACTG GGACCATGCA
GATGAGCTGT TCGATGGTGC AGGTCTGGTA TTGGTGACAG TGCCCATTGC GACTACCTGC
TCGCTTATCC GTGAGCGCCT GGATCACCTT CCCGAGCACT GTATCTTGGC GGATCTGACC
TCCGTCAAAG GGGCGCCACT CAAGGCCATG CTGGAAACCC ATAAGGGCCC AGTGGTGGGG
TTGCACCCCA TGTTTGGTCC GGACGTGGGC AGTTTGGCCA AACAGGTGGT GGTAGTGTGC
CATGGCCGTG CGCCGGAAAA GTACCAATGG CTGATGGAGC AGATTGGCAT CTGGGGCGCC
AGACTGGTCG AGGCCGATGC GGGTCGCCAT GATAAGGCGA TGCAGCTGGT GCAGGCTATG
CGTCACTTTT CATCGTTTGT GTATGGCTTG AACCTGTGCC GTGAGCAGGC TGATATAGAC
ACGCTGCTTG AATTCAGCTC GCCTATTTAT CGGCTGGAGC TGGCCATGGT GGGGCGTCTC
TTTGCCCAGA GCGGCGAGCT GTACGCCGAC ATTATTTTTG CCCAGGAAGA AAGCCTGACG
GCGATTTCGG ACTTCATCGA TAACTACCGC GATGCACTGG AGCTTCTGAA AACAGGCGAT
AGGGCAGGCT TTATCGCACG CTTTAATGAA GTTTCAAACT GGTTTGGCAA TTACTCCCAA
CAGTTCCTTA CCGAGAGTCG CGCCATGCTG CAATCGGTCA ATGATATGCG TTCAGTTTAA
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| Protein sequence | MTEKTTAELE NLRGLIDGVD SQLLSLLRKR LDLVAQVGTV KHAAGLPIYA PAREAAMLGK
RRAEAEAMGV SPQLIEDILR RLMRESYMSE KDVGFKQVNP ELGHIVIIGG QGQLGRLFAQ
MFALSGYEVR LLDKDDWDHA DELFDGAGLV LVTVPIATTC SLIRERLDHL PEHCILADLT
SVKGAPLKAM LETHKGPVVG LHPMFGPDVG SLAKQVVVVC HGRAPEKYQW LMEQIGIWGA
RLVEADAGRH DKAMQLVQAM RHFSSFVYGL NLCREQADID TLLEFSSPIY RLELAMVGRL
FAQSGELYAD IIFAQEESLT AISDFIDNYR DALELLKTGD RAGFIARFNE VSNWFGNYSQ
QFLTESRAML QSVNDMRSV
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