Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0879 |
Symbol | |
ID | 4603131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1068870 |
End bp | 1069787 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780214 |
Product | Signal peptidase I |
Protein accession | YP_926756 |
Protein GI | 119774016 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.510509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.115217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGT ATTTTTCACA AATTCTGGTG ATAGTCACCC TGGTGTCAGG GTTGATTTGG CTGTTTGATG TGTTGTTTCA GGCCCCTAAG CGCAAGGCCG CATTGGCTGT GGCTCAGTCC GGCGATGCCA ACCTGTCAGA AGACGCTGTC GAAGCCATCA CCAAGGAACC CTACATAGTC GAAACCGCAC ACTCTGTGTT CCCGGTCATC GCCTTTGTAT TGGTGCTGCG TTCGTTCCTG TATGAACCTT TTCAAATTCC GTCCGGCTCC ATGATGCCAA CCCTGTTGGT GGGGGACTTT ATTCTGGTGG AAAAATTCAG CTACGGCATC AAAGAGCCTA TGTGGCGCAA AGAGGTTATC GCCACAGGTA AGCCGGAGCG CGGTGATGTG GTGGTCTTCA AATACCCTGA AGATCCCAGA ATTGACTATA TTAAGCGTGT GGTAGGCCTG CCGGGAGACC GCGTGTTTTA TCAAAACAAA GAGCTCTACA TTCAGCGAGC CTGTGTTGAA GGCGAGATCT GCCAGAGCGT CCCAGCCAAG GTTGACCGTA TTGCCCTTGG CGACAGCGAG TTTGTGCAGG ATGGCGTGCG TCTTAAGCAT TACAAAGAGC AGCTTGGCGA CGTTGAGCAC GAAATTTTGA TTAATCCAGC CCGCCCCGAC ATGCGCGGCA TGTTCTACCG CAAAGGCAGT GTGCCAGCGG GTGAATTTGT GGTGCCGGAA GGCCAATACT TTGTGATGGG TGATAACCGC GACAACAGTA CCGACAGCCG TTTTTGGGGC TTTGTGCCCG AAGAGAACCT TGTGGGTAAG GCCGTGGCCA TTTGGATTAG CTTTGAGTTT GACCGCAAGC CATCTGACAC CCTGCCAACC TGGGTGCCCA CAGGTGTGCG TTTTGAGCGC GTAGGCGGTA TCCAGTGA
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Protein sequence | MAAYFSQILV IVTLVSGLIW LFDVLFQAPK RKAALAVAQS GDANLSEDAV EAITKEPYIV ETAHSVFPVI AFVLVLRSFL YEPFQIPSGS MMPTLLVGDF ILVEKFSYGI KEPMWRKEVI ATGKPERGDV VVFKYPEDPR IDYIKRVVGL PGDRVFYQNK ELYIQRACVE GEICQSVPAK VDRIALGDSE FVQDGVRLKH YKEQLGDVEH EILINPARPD MRGMFYRKGS VPAGEFVVPE GQYFVMGDNR DNSTDSRFWG FVPEENLVGK AVAIWISFEF DRKPSDTLPT WVPTGVRFER VGGIQ
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