| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0877 |
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| Symbol | |
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| ID | 4603129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1066319 |
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| End bp | 1066798 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780212 |
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| Product | sigma-E factor regulatory protein RseC |
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| Protein accession | YP_926754 |
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| Protein GI | 119774014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.475594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0507678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAG AGCTGGCCCG TGTCGTGCGG GTCGAAACCT CTGGCTGGGT GACGGTCGAA
GTGGAAGTCA AAACGGCCTG TGGACACTGC GCTGCCAGTG AAAACTGTGG CACGGGTGCC
ATCGCCAGCG CGTTTGCCGG TAAAACCCAG CAGTTCTCAA TCAAAAGCGC CGAGACTTTT
GAGAACGGTG AGCTTATTCG CCTCGGGCTG CCTGAATCAG CGCTGCTCAA AGCGGCGGCG
CTGGTGTATC TGCTCCCACT TGTCGGTTTA CTGCTGGGGG CCTTGGGCGG CAAGATGGCA
GGCTCAGTGT TAAGCTTTGG CAGTGAAACT GCCAGTCTGG TGTTTTCGCT GCTGGGGGCC
ATAGTGGCCT GGCTCTGGGG TAAGCGGCTT GCCAAAAATC TTGAGCGTCA AACTCAACCT
GTCATCCTCG CCCGCCTGGG CAAAGCGCTG GAACCCTCTT GCCTGACTAA AGCAGTCTGA
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| Protein sequence | MMEELARVVR VETSGWVTVE VEVKTACGHC AASENCGTGA IASAFAGKTQ QFSIKSAETF
ENGELIRLGL PESALLKAAA LVYLLPLVGL LLGALGGKMA GSVLSFGSET ASLVFSLLGA
IVAWLWGKRL AKNLERQTQP VILARLGKAL EPSCLTKAV
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