| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0864 |
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| Symbol | |
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| ID | 4603116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1054294 |
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| End bp | 1056528 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780199 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_926741 |
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| Protein GI | 119774001 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00610428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.087178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAATA CGCTCAGGGA TATCACACAA TCGGTGGCGT CGGCCCATAC CCTCGAGTTG
GCACTCGAGT CCCTGGTGGG CCAGACCAAG GCCGCCATGG AAACAGAGTG TTGTTCCATC
TATATCCTCG AACAACAACA ATTGGTGTTG TCTGCCACCG ATGGGCTTGA AAAATCCGCC
GTGGGCCGGG TCAAGATGCC GCTCAGCGAA GGGCTTGTTG GCCTGGTCGC CCAGCGTGAA
GAAGCCATTA ACCTCGCCGA CGCCCATCTG CATCCCAGAT TCAAGCTGTT CCCTGAGGCC
AACGAAGACG AATACCGCGC TTTTTTGGCC GCCCCCATCA TTTATCAAAA ACAGTTACTT
GGCGTTATTG TGGTGCAGCA GGCAAAGGCA CGTCAGTTTA ATGAGGGTGA AGAAGCCTTC
CTGATGACGC TCGCCGCGCA GCTTGCCATG GCCATTCGGG GCCTGAAACG GCGCGCAGAA
GTGCATTCAC TGGATCATCA GGTGCTGTTC ACTGGCACCA GTGCCTCCAC GGGTGTTGCC
ATTGCCCATG CCCTGGTCAT CGGCGGCGAA ATCTCCCTGG AACAACCCGA AGCCTGTGCG
ACCGATGTGG ACGCAGAGGT GAATCGGTTA CGCCTGGCCA TGGGACGCAG TCGTGATGCC
TTAACGGCTT TGGCGCAAAA GTTTGAAAAT GACCATGATG ATGAGCTGAG CTCCATCTTC
ACGTCGCTGC AGTCCTTACT GGAAGACGCA AGCCTTGGTG GTGAATATCA GCGAGAAGTG
CTGGCTGGTT GGAGCGCTGA AACCGCGGTG AGCAGGGTGT CGCTGCGCTA CGTGGCTCAG
TTTGAAACCA TGGAAGATGC TTATCTTCGT GAACGGGCGA GCGATATCCG GGATTTGGGG
CAGAGAGTAC TGCGCCAACT GATTGAGCCC GGCCGCATGA TGCTCGATCC CGATAAGCCC
GTTATCCTGG TGACCCGTGA AGCCGACACC AGCATGCTGG CCGAGTTTCC GAGGCAAAAG
CTGGCCGGGA TAGTGACAGA AGCCGGTGGG GTTAACTCCC ATGCGGCCAT CCTGGCCAGA
GCGTTGGGCG TACCTGCCAT CATGGGGGTC GAGCAGGTGT TGCAGGCCAA TCTGGATAAG
CAACTTCTGG TACTCAACGC CAGTCGCGGT ATCTTAATGG TTTCGCCGTC GCCGACCGTG
GTGGACGAGT ATCGCAATCT TATCAGTGCC CAAAAGGCCC TCGATCGTCA GTACGCCGAG
GAGCTGAAAG AGCCCGCCTT GACCCTGGAC GGTCATCGTA TACATCTGTA TCTCAATGCG
GGACTCATGA GCGGCGTGTC GAGCGAAATT GCCGATGGCG CAGATGGTGT TGGGCTATAC
CGCACCGAAA TCCCCTTTAT GTTGCAGCAG CGTTTCCCCA GTGAGTCCGA GCAGATAAAG
GTGTATCGCA GCGTGTTGCA GTCGGCCGCC GGTCGGCCCG TGGTGATGCG AACTCTGGAT
GTGGGGGGGG ATAAGCCGCT GCCCTATTTT CCAATCTCCG AAGAAAATCC TTTCCTGGGC
TGGCGGGGTA TTCGTCTGTC GCTGGATCAT CCCGAACTGT TCCTGGTGCA ACTAAGAGCC
ATGCTGCAGG CGGCTGGCGA CACCGACAAC CTGAAAATTT TGCTGCCTAT GGTGAGCAGT
CTCGATGAGA TAGATGAGGC GCTGCTGTAC CTGGACCAGG CGTTCAGTGA ACTTAGGGCA
GACGTTAACC CATCACTGGC ACGCCCTCCC GTTGGGGTGA TGCTGGAAGT CCCGGCGCTG
CTGTACCAGC TCAGAGAAGT TGCCCAACGG GTCGAGTTTG TCTCTGTGGG CAGCAACGAC
CTGACCCAAT ATTTGTTGGC GGTTGACAGA AACAACCCCC GCGTCAGTAG CCTGTATGAT
TCATATCACC CTGGCGTTTT GCGGGCGTTG CAGCTGGCGT TGCAGGAATG TCGCCAGCAT
AAGTTGGATG TGAGTGTGTG CGGTGAGCTT GCCGGTGAGC CCATGGGCGC GCTGCTGCTG
GTGGCCATGG GCTATGACGA ACTGTCCATG AACCAGGGGA GTCTTGCCAA AATAAATTAC
CTGCTGCGAC GCGTTGAGCG CAGCGAGCTG GAGCAGTTGC TTGCACTGGT GATGCAAATG
TCCAATGGGC AGGATGTGCG TGAACTGGTG CGTGAATATC TCGATACGCG GGAACTGAGC
TCCATCCTGG GATAA
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| Protein sequence | MLNTLRDITQ SVASAHTLEL ALESLVGQTK AAMETECCSI YILEQQQLVL SATDGLEKSA
VGRVKMPLSE GLVGLVAQRE EAINLADAHL HPRFKLFPEA NEDEYRAFLA APIIYQKQLL
GVIVVQQAKA RQFNEGEEAF LMTLAAQLAM AIRGLKRRAE VHSLDHQVLF TGTSASTGVA
IAHALVIGGE ISLEQPEACA TDVDAEVNRL RLAMGRSRDA LTALAQKFEN DHDDELSSIF
TSLQSLLEDA SLGGEYQREV LAGWSAETAV SRVSLRYVAQ FETMEDAYLR ERASDIRDLG
QRVLRQLIEP GRMMLDPDKP VILVTREADT SMLAEFPRQK LAGIVTEAGG VNSHAAILAR
ALGVPAIMGV EQVLQANLDK QLLVLNASRG ILMVSPSPTV VDEYRNLISA QKALDRQYAE
ELKEPALTLD GHRIHLYLNA GLMSGVSSEI ADGADGVGLY RTEIPFMLQQ RFPSESEQIK
VYRSVLQSAA GRPVVMRTLD VGGDKPLPYF PISEENPFLG WRGIRLSLDH PELFLVQLRA
MLQAAGDTDN LKILLPMVSS LDEIDEALLY LDQAFSELRA DVNPSLARPP VGVMLEVPAL
LYQLREVAQR VEFVSVGSND LTQYLLAVDR NNPRVSSLYD SYHPGVLRAL QLALQECRQH
KLDVSVCGEL AGEPMGALLL VAMGYDELSM NQGSLAKINY LLRRVERSEL EQLLALVMQM
SNGQDVRELV REYLDTRELS SILG
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