Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0852 |
Symbol | |
ID | 4603104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1039043 |
End bp | 1039666 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780187 |
Product | hypothetical protein |
Protein accession | YP_926729 |
Protein GI | 119773989 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.410151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTGGT TTTACTTTTT TGACCTTTGC GGCACAGCCG TGTTTGCGCT CACCGGAGCC CTCGCGGCAG GCAGACACAG AATGGACCCC TTTGGCGTGA CAGTGCTGGC CGCCGTTACG GCCGTGGGTG GCGGTACGAT TCGGGATGCC ATTATCGGTG CCACCCCGGT GTTTTGGCTG CGCGACCCCA ATTACCTGAT TGTCATCCTG GCAACCGTGG GTTTTACCCT GGTGTTTATC CGGCGCCCCC GTAAGGTGCC CCAATACACC CTGCCCATCG CCGATGCGCT GGGATTGGCA CTATTTACCG TGATAGGCGC CCAAAAAGCG CTCAGCCTCG GCCTTAATGG CATGTCTGCT GTGATCATGG GCTTGATTAC CGGCGTGGGT GGCGGCATTA TCCGGGATGT ACTCTGTCGC CAAATTCCCA TGGTGCTCAG AACCGAAATC TACGCAACCG CCTCCATTCT GGGTGGCATT GCCTATACCC TCAGCCTGCA ATTAGGCATG AACAGCCAAA CCGCTCTTTG GCTGTCGATG CTCAGTGCGC TGATCTTGAG GCTTGCGGCC ATTCGCTGGC ACCTTTCATT GCCGGCCTTC GACCTGAAAA CCCGGAGAGA CTGA
|
Protein sequence | MSWFYFFDLC GTAVFALTGA LAAGRHRMDP FGVTVLAAVT AVGGGTIRDA IIGATPVFWL RDPNYLIVIL ATVGFTLVFI RRPRKVPQYT LPIADALGLA LFTVIGAQKA LSLGLNGMSA VIMGLITGVG GGIIRDVLCR QIPMVLRTEI YATASILGGI AYTLSLQLGM NSQTALWLSM LSALILRLAA IRWHLSLPAF DLKTRRD
|
| |