Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0850 |
Symbol | |
ID | 4603102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1037269 |
End bp | 1038468 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780185 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_926727 |
Protein GI | 119773987 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.508518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.448764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TGGACCAGGT ATTAGCAGAA ATTAAACGGG GCACAGACGA GATCCTGCTC GAAGCAGATC TGATTGAGAA ACTGAAAGAG GGCCGTCCAC TGCGGGTGAA GCTGGGTGCC GATCCTACCG CTCCCGATAT CCATCTGGGC CACACGGTTA TTCTGAACAA ACTGCGTCTG TTTCAGGAGC TGGGGCACGA AGTTATCTTC CTTATCGGTG ACTTCACCGG CATGGTAGGT GACCCAAGTG GTAAAAACAG TACCCGTCCG CCACTGACCC GTGAGCAGGT TCTGGCCAAC GCTGAAACCT ACAAGGAACA GGTGTACAAA ATTCTCGATC CGGCCAAGAC GCGCATCGAA TTCAACTCCA GCTGGCTTGA GCAGCTTGGT GCTGCCGGCA TGATCCGCCT GGCTTCCCAT CAAACCGTGG CCCGCATGCT GGAACGTGAT GATTTTAAAA AGCGTTATGG CAGCGGTCAG CCCATCGCCA TCCATGAGTT TATGTACCCG CTGCTGCAGG GTTGGGACTC GGTTGCGCTG AAGGCAGACA TTGAACTGGG TGGTACCGAT CAGAAGTTCA ACCTGCTGAT GGGCCGGGAG CTGCAAAAGG CCGAAGGTCA GAAGCCGCAG ACAGTGATTA TGATGCCGCT GCTGGAAGGT CTCGATGGCG TCAAGAAGAT GTCCAAGTCT GCCCACAACT ATATAGGTGT GAGCGAAGCG CCGGATGAAA TGTTCGGTAA GCTGATGTCT ATTTCAGACG AGCTGATGTG GCGCTACTTC GATCTGTTGT CGTTCCGCCC ATTGGCAGAA GTACAGCAGT TCAAGGCCGA TGTGGAAGCC GGAGCCAACC CAAGAGACAT CAAGATCGCG CTCGCCAAGG AAATCATTGC CCGTTTCCAC GACCAGGCCG CCGCCGATGC TGCTCATCAG AACTTTATCG ACCGTTTCCA GAAGGGGGCT ATCCCCGATG ATATCGAAGA AGTAACCCTG AGCGCAGGTG CTGAAGGTAT GGCAGTGGCC AACCTGCTCA AAGAAGCTGG TCTCGTGGGT TCGACCTCCG ATGCCATGCG AATGATTAAG CAGGGAGCGG TGAAAATGGA CGGTGAAAAG CTGGAAGATG CCAAGCAGGT ATTCAGTGCC GGTCTGAGCG CCGTATTCCA GGTTGGCAAG CGCAAGTTTG CCAAGGTGAC TCTGAGCTAA
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Protein sequence | MADLDQVLAE IKRGTDEILL EADLIEKLKE GRPLRVKLGA DPTAPDIHLG HTVILNKLRL FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE FNSSWLEQLG AAGMIRLASH QTVARMLERD DFKKRYGSGQ PIAIHEFMYP LLQGWDSVAL KADIELGGTD QKFNLLMGRE LQKAEGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEA PDEMFGKLMS ISDELMWRYF DLLSFRPLAE VQQFKADVEA GANPRDIKIA LAKEIIARFH DQAAADAAHQ NFIDRFQKGA IPDDIEEVTL SAGAEGMAVA NLLKEAGLVG STSDAMRMIK QGAVKMDGEK LEDAKQVFSA GLSAVFQVGK RKFAKVTLS
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