| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0840 |
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| Symbol | |
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| ID | 4603092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1024575 |
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| End bp | 1025594 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780175 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_926717 |
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| Protein GI | 119773977 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.591266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGT TCAAAGGATC TCACATCCTC TCCGTAAACC AGTTCAATCT GGACTCCATT
CACACTATTT TCAATGTTGC CGAGCGTATG GCGCCCTATG CGTTACGGGA AAAACGTACC
CGGGTGTTGG ATGGTGCCAT ATTGGGGAAT CTGTTCTTTG AACCCAGCAC CCGTACCCGG
GTGAGCTTTG GCTGTGCCTT TAACCTGCTG GGCGGCCGCG TGGCGGAAAC CGTGGGCATG
GCCTCATCTT CCTTGTCCAA GGGTGAATCG CTGTACGACA CAGCCCGTGT GCTGTCGACA
TACTCAGATG TGATTGCCAT GCGTCATCCC GATGCCTACT CGGTGCGCGA ATTCGCTGAG
GGCAGCCGGG TGCCGGTGAT CAACGGTGGC GACGGCCCCA ACGAACATCC GACTCAGGCC
CTGCTGGATT TGTTCACCAT CCAGAAGGAG CTCAGCCACG CCGGTATGAG TATTGACGGC
ATGCACATCG CCATGGTGGG CGACCTTAAA TTTGGCCGCA CAGTACACTC ACTGTCACGC
CTGCTGTGTC TGTACAAAAA CGTCAGCTTT ACCCTGATTT CTCCCAAAGA GCTGGCAATG
CCCGATTATG TGATAGCCGA CATTGAAAAT GCCGGCCATA AGGTCACAAT AACCGATCAG
CTGGAAGGCA ATCTGGACAA GGCCGACATC CTGTACCTGA CCCGAATTCA GGAAGAGCGC
TTCCCGTCAC AGGATGAAGC CAACAAGTAT CGCGGCAAGT TCCGTCTCAA CCGCAGCATT
TACACCCAGC ACTGTAAGTC CAATACGGTG ATCATGCATC CGCTCCCCCG GGACTCACGT
GCCCAGGCCA ACGAGCTGGA CAATGATTTG AACAGCCATC CTAACCTGGC CATATTCCGC
CAGGCCGATA ACGGGCTGCT CATTCGCATG GCGCTGTTTG CCCTGACATT GGGCGTGGAC
TCACAGCTGG AAAAGTACGA GTGTCCGGTT AACTGGTATT CACGCAAGGC TGACTTCTAA
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| Protein sequence | MTQFKGSHIL SVNQFNLDSI HTIFNVAERM APYALREKRT RVLDGAILGN LFFEPSTRTR
VSFGCAFNLL GGRVAETVGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DAYSVREFAE
GSRVPVINGG DGPNEHPTQA LLDLFTIQKE LSHAGMSIDG MHIAMVGDLK FGRTVHSLSR
LLCLYKNVSF TLISPKELAM PDYVIADIEN AGHKVTITDQ LEGNLDKADI LYLTRIQEER
FPSQDEANKY RGKFRLNRSI YTQHCKSNTV IMHPLPRDSR AQANELDNDL NSHPNLAIFR
QADNGLLIRM ALFALTLGVD SQLEKYECPV NWYSRKADF
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