Gene Sama_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0833 
Symbol 
ID4603085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1016164 
End bp1016427 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content53% 
IMG OID639780168 
Productmajor outer membrane lipoprotein, putative 
Protein accessionYP_926710 
Protein GI119773970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.24334e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TACTGCTGAT CGCCGGTGTT GCCATGACTG CTCTGCTGGG TGGCTGTGCC 
AACACTACCG CTCTGGAAGA AAGCGTTGCC AACCTGAGCA ACAAAGTAGA CCAACTGTCT
GCTGACGTAA GTGCTCTGAA GTCTGAGCAA GGCCAGATCG CTGCTGACGC CAAGGCTGCC
AAAGCTGCCG CTATGGACGC TCAAGCTGAA GCCAAGCGTG CTAACGACCG TCTGGACAAC
GTAGCTTCTT CTTACAAGAA GTAA
 
Protein sequence
MKKVLLIAGV AMTALLGGCA NTTALEESVA NLSNKVDQLS ADVSALKSEQ GQIAADAKAA 
KAAAMDAQAE AKRANDRLDN VASSYKK