Gene Sama_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0829 
Symbol 
ID4603081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1013521 
End bp1013880 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID639780164 
Productdihydroneopterin aldolase 
Protein accessionYP_926706 
Protein GI119773966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000184652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG TACTGATCCG TGCCCTGCGT ATCGACACCG TTATCGGTGT GTACGACTGG 
GAAAAAGCCA TTCAGCAATC GCTGTTTCTC GATTTGGACA TGGCGTGGGA TATTAAACCC
GCCGCTGGAA CCGATGATTA CAGCCATGCC CTGTGCTACG AGACTGTCTC AAATCGTCTG
ACAGCCCTTA TCACTGAAAA ACCCATTGAG CTGATTGAAA CCGTCGCCGA AATGACTGCC
CGCTGCGTGC TGGATGAATT CAGGGTGTCC TGGGTTCGGG TCCGGGTAAT GAAACCCGGC
GCGGTGAAAA CGGCCGAGGC CGTGGGCGTT GAAATTGAGC GCAGTGCCGG GGATTGCTGA
 
Protein sequence
MDKVLIRALR IDTVIGVYDW EKAIQQSLFL DLDMAWDIKP AAGTDDYSHA LCYETVSNRL 
TALITEKPIE LIETVAEMTA RCVLDEFRVS WVRVRVMKPG AVKTAEAVGV EIERSAGDC