Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0813 |
Symbol | |
ID | 4603065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 997799 |
End bp | 998560 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639780147 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_926690 |
Protein GI | 119773950 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGC TGAGCGGACG GGTACTTATC ACAGGCGCCA GCTCTGGCAT AGGGCAGGCG CTGGCACTGG AATACCTAAA ATCAGGTTGG CAGGTGGTGG CCTGTGGCCG TGATAGAGCA CGCCTCGATG CCTTATTGGA CGCCCATCCG CGCTTTGCCT GCCAACTCTC CACGCTAACG TTTAACGTGT GTGACAGGCT GGCCTGCCTC GAGGCTGCGT CGTCACTGGA TGGTGAGCTT GACCTTATCA TCCTTAACGC AGGCAGCTGC GAGTACATAG ATAATCCCAA GGCCTTCGAT GGGAAGCTGT TCGCCCGGGT CATTGAAACC AACCTGATTT CTGTGGGTTA TTGCCTGGAG GCCTTCTTGC CTGCATTGGC TGCAGGTGGT CGGCTGGCGT TGATGGGCTC CAGCGCAGCG CTCTTGCCGC TGCCCCGAGC CGAAGCGTAC GGCGCCTCTA AGGCCGCATT GGCATATCTG GCAAGTACCT TGCGATTGCA TCTGGCGCCC GCAGACATTG GCGTATCCCT GATAGAACCG GGTTTTGTGC GCACCCCACT GACGGACAAA AACGATTTCC CCATGCCGGG ACGGATAGAA GTTGAAGATG CGGCGCGGCG TATTGTTGAT GCTCTTGCCA GGGAAAAAGA CCGTATTCAA TTCCCTCGCA GGCTGCTGTG GCCCATGCGG CTGCTTGCGC TGCTGCCGGG CGCCGTATGG GGCCTGATAG CCCGAAGCAA TGTCAGTCGC CAGTCGGCCT GA
|
Protein sequence | MTMLSGRVLI TGASSGIGQA LALEYLKSGW QVVACGRDRA RLDALLDAHP RFACQLSTLT FNVCDRLACL EAASSLDGEL DLIILNAGSC EYIDNPKAFD GKLFARVIET NLISVGYCLE AFLPALAAGG RLALMGSSAA LLPLPRAEAY GASKAALAYL ASTLRLHLAP ADIGVSLIEP GFVRTPLTDK NDFPMPGRIE VEDAARRIVD ALAREKDRIQ FPRRLLWPMR LLALLPGAVW GLIARSNVSR QSA
|
| |