| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0794 |
|---|
| Symbol | |
|---|
| ID | 4603046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 978676 |
|---|
| End bp | 979479 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926671 |
|---|
| Protein GI | 119773931 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTAC AACAAGAATC AGCAAGACAA GAACGAAAAC CGGTCATTTT AATGTCCATG
GGTCAGCAAG ACAGAAATGG CCACGCCTAT CAGGTCATGA CCCACAAATA TATGCAGCCA
GTGGTAGACA TTTCCGACTG CATTCCGCTA CTTATCCCTA CCTGCTTCGG TGTGGCAGAT
ATTGAACAAT ATCTGGACAT GGCCGACGGC GTATACCTTT CCGGTGCCGC CTCCAATATC
GACCCCAGTC TCTATGGTCA GGAAAACCTC ACGCCCGAAA AAAAGCAGGA TTTGGCACGG
GATCTGGTGG ATATTGCGCT TATCAAGGGT GCCGTTAAAC GGGGCTTGCC GATACTGGGC
ATCTGCCGTG GCATGCAGGA GATGAATATC GCCTTTGGCG GCGATCTTTA TCAGAAGGTG
CATGATGAGG ACCATCTGAA CGATCACCGT GAAGACCCGG ACACACCGCC CGACGTGCAG
TATGGCGCCA GTCACAGCAT CAGCATGGTG AAAGGCTCCT GGCTGCATAA GCTGCTCGGG
GACACCATAG AGGTTAACTC CCTCCACGGT CAGGGCATTA AAACCCTGGG TAAGGGGTTG
GAAGCGCTGG CGTTGGCCGA AGATGGTCTG GTGGAGGCGC TGCACGCTCC TTATCTGCCG
CAGTTCACCC TTGGGGTACA GTGGCATCCC GAGTGGAAGG CGCTTGAAAA CCCTGACTCC
ATCAAGATTT TCAAGGCCTT TGGTGAGGCT TGCCGTCGCC GTGCTGGCAG CGCCCTGGAT
CTGAGAATCG ACAAGGCGTC CTGA
|
|---|
| Protein sequence | MPLQQESARQ ERKPVILMSM GQQDRNGHAY QVMTHKYMQP VVDISDCIPL LIPTCFGVAD
IEQYLDMADG VYLSGAASNI DPSLYGQENL TPEKKQDLAR DLVDIALIKG AVKRGLPILG
ICRGMQEMNI AFGGDLYQKV HDEDHLNDHR EDPDTPPDVQ YGASHSISMV KGSWLHKLLG
DTIEVNSLHG QGIKTLGKGL EALALAEDGL VEALHAPYLP QFTLGVQWHP EWKALENPDS
IKIFKAFGEA CRRRAGSALD LRIDKAS
|
|---|
| |