| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0793 |
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| Symbol | |
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| ID | 4603045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 977306 |
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| End bp | 978382 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780127 |
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| Product | outer membrane protein RomA |
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| Protein accession | YP_926670 |
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| Protein GI | 119773930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC AAACCGGTGA AGCCTCGAAA ATCAAAGGCC GCTTTCGTAA TAGCCACAAG
GTCTATGGCG CAGGTCTTGG GGATTTGGTG GGCATCATCA AGGCGTATCT GGGCGCCAAA
CGCAGTGCTC CCAGCCCGAA AAGCGCCGTG CCATTGCAGC CCATCACCCC CGCTGAGCTT
GCCCGGCCTC AGGCGCGGTT ATATCGACTG GGCCATTCCA CTGTGCTGAT GTATCTGGAT
GGCAAATGGC TGCTGACCGA TCCTGTATTC AGTGAGCGAG CCTCACCGTT TCAGTGGGCC
GGCCCCAAGC GGTTCCACCA AAGTCCCATC GCCATTGAGG CGCTGCCGGA CATCGATGGG
CTGATTTTGA GCCACGATCA TTACGACCAT CTGGACACCG CCGCCATTAA GGCACTCGCA
GCGCGGGTAA AACACTTTTA TATGCCTTTG GGCGTGGGTA AACGCCTTAT CCGCCTCGGC
ATTGATAAGG CCAGGATAAC TGAACTGGAT TGGTGGCAGT CGGTACAACT TGGAACCATA
GAGCTGACCG CGACCCCGGC GCAGCATTTC TCTGGCCGTG GGCTGTTTGA CAGAGACGCC
ACCCTGTGGG CCGGTTGGGC CATCCACGGT GAGCAGGCGC GGGTATTTTT CAGCGGTGAC
TCGGGCTATT TTCCGGGTTT TGCCGAAATC GGTGAGCGAC TAGGCCCCTT CGATGTGACC
CTGATGGAAA CCGGCGCCTA CAACGAGCTG TGGCGAGATA TTCACATGAT GCCCGAGGAG
AGTTTGCAGG CACATCTGGA TGTTAAAGGG CAGCTGATGG TGCCCATTCA TAACGGCACC
TTTGATTTGG CGCTGCACGA CTGGTTTGAA CCCCTTGAGC GCATTCGCGC GCTGGCGTGG
GACCGGTCGG TGAAGATTGC CACCCCGATT TTTGGTGAAG CCCTGAGTTT AACCCTGCCA
GGAAGCGGCA GTGATTGGTG GGCACAGGAG TCGGCTATTT CGACAGGTGT GGATGCCCGT
GAGAAGGGAA GAGCCCCGGC TGCTGAAAGC TCGATGGTCG GTATTGCTGA AAGCTAA
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| Protein sequence | MSQQTGEASK IKGRFRNSHK VYGAGLGDLV GIIKAYLGAK RSAPSPKSAV PLQPITPAEL
ARPQARLYRL GHSTVLMYLD GKWLLTDPVF SERASPFQWA GPKRFHQSPI AIEALPDIDG
LILSHDHYDH LDTAAIKALA ARVKHFYMPL GVGKRLIRLG IDKARITELD WWQSVQLGTI
ELTATPAQHF SGRGLFDRDA TLWAGWAIHG EQARVFFSGD SGYFPGFAEI GERLGPFDVT
LMETGAYNEL WRDIHMMPEE SLQAHLDVKG QLMVPIHNGT FDLALHDWFE PLERIRALAW
DRSVKIATPI FGEALSLTLP GSGSDWWAQE SAISTGVDAR EKGRAPAAES SMVGIAES
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