| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0779 |
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| Symbol | |
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| ID | 4603031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 961689 |
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| End bp | 962561 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780113 |
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| Product | glutamyl-tRNA synthetase domain-containing protein |
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| Protein accession | YP_926656 |
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| Protein GI | 119773916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00289158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTATT CCCCCTACAT TGGCCGTTTT GCCCCCTCCC CCTCTGGCTC ACTGCATTTT
GGCTCGCTGA TTGCCGCCCT GGGCAGCTTC CTGCGCGCCC GCAGTCAGGG TGGACAGTGG
CTGGTGCGCA TCGAAGACAT AGACCCGCCG CGGGAAGTGC CCGGCGCCGC CGACGACATC
CTCCGCACTC TGGACGCCTT TGGATTGCAC TGGGATGGCA AACTGATGTA CCAAAGTCAG
CGCACCGAGG CCTATCAGGC CAAAATCGAT GTGCTGCTGG CAAGCGGCGA GGCCTATTTT
TGCCAATGCA CTCGCAAGCA AATTCAGGCC ATAGGTGGGG TTTACGATGG TCGCTGCCGC
CAACTTGGCC ATCAAAGCGG TGCCATACGT ATCGTTAATC GTGCCCGGGT GAATCATTTT
CACGATGGCC TGATGGGCGA GGTAGCAGTG CCAGACAGTT TTGCCGCCGA AGACTTTATC
ATCAAGCGCA GCGATGGCCT TTACGCCTAC CAGCTTGCGG TGGTGATGGA CGATGCCAAA
ACCGGCATTA CCGAGGTGGT GCGCGGCGCT GACCTGATTG AAGCCAGTTG CCGTCAGCTG
AGCCTGTTCA ACCAATTTGG CTATCAGGCA CCTGCCTGGA TGCACCTGCC GCTGGCGTGC
GCCGAGGCAG GATTCAAGCT GTCGAAACAA AACCATGCCA CACCAGTAGA CAAGGCCAAT
CCCCTGCCGG CTCTCAAGGC TGCGCTGGCA TTTTTGGGTC AGCCAATACC CGATGCCCAC
AGCGTCGAAA GCCTGCTGGC ACAGGCAGTG GCGGACTTTT CTGTGGCCTC CATTCCACGG
CGGCGGGAAA TCCTCATTGA CGGTGGTGGC TAA
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| Protein sequence | MSYSPYIGRF APSPSGSLHF GSLIAALGSF LRARSQGGQW LVRIEDIDPP REVPGAADDI
LRTLDAFGLH WDGKLMYQSQ RTEAYQAKID VLLASGEAYF CQCTRKQIQA IGGVYDGRCR
QLGHQSGAIR IVNRARVNHF HDGLMGEVAV PDSFAAEDFI IKRSDGLYAY QLAVVMDDAK
TGITEVVRGA DLIEASCRQL SLFNQFGYQA PAWMHLPLAC AEAGFKLSKQ NHATPVDKAN
PLPALKAALA FLGQPIPDAH SVESLLAQAV ADFSVASIPR RREILIDGGG
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