Gene Sama_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0760 
Symbol 
ID4603012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp943264 
End bp944079 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID639780094 
Productiron-compound ABC transporter, ATP-binding protein, putative 
Protein accessionYP_926637 
Protein GI119773897 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG CCATCGAAGT CAGCAACCTC TGCTGGCGGG TAGCTGAGCG GCCGCTGCTG 
GACGGCGTGA GCTTTGCCCT GTCCGGAAAC GGCATGTACG GGGTGATTGG CCCCAATGGT
GCCGGAAAGT CATCCTTGCT GCGTTGTCTG TACCGGTTTA TTCGCCCGGA CAGCGGCACC
ATACTGCTCA ATGGTCAGGA TATTCATCTC TATTCCCGGC GCAGCTTTGC CCGCGCTGTT
GCCGTGGTGC CTCAGGAATT GCCTGCGCTG TTTGATCTCT CAACCGAGGC CGTGGTTGCC
ATGGGGCTTA TCCCCCACAA GGGCTGGCTT GCTGCCGACA GCGCCGCCGA TAAGGTGAAT
ATTGCGGCCG CGCTGGCGGA AGTCGGGCTC GAAGGATACG GCCGCCAACC CTTTGGCAAG
CTGTCCGGTG GTGAAAAACA GCGGGCGCTC ATTGCCCGGG CGCTGGTGCA AAAACCGCAG
TTTCTTATCC TGGATGAACC CACGAGCCAC CTGGATGTGC GTTTTCAAAT CGAAGTGCTG
GAACTTCTCA AGCGCCTGGA TATCTGTGTG ATTTGCACCA TTCACGACCT GAACCTGGCC
AGTGCCCTGT GCGATGAACT GCTGCTGATG TCCCGTGGCC GCCTTGAGGC TTCGGGCTCG
CCTGCTGAGG TGCTTACCGA GACCATGCTT GCTTCGGTAT TTGGGGTGTG CACTACAGTT
AAGCCTCATC CCCAGCATGG TCGCCCGCTC ATCCATTACT ACTATGGCTA TAACGGCCGC
ACCGCCTCCC AAGAAAAAGA AGAGGTGAGC CTGTGA
 
Protein sequence
MTPAIEVSNL CWRVAERPLL DGVSFALSGN GMYGVIGPNG AGKSSLLRCL YRFIRPDSGT 
ILLNGQDIHL YSRRSFARAV AVVPQELPAL FDLSTEAVVA MGLIPHKGWL AADSAADKVN
IAAALAEVGL EGYGRQPFGK LSGGEKQRAL IARALVQKPQ FLILDEPTSH LDVRFQIEVL
ELLKRLDICV ICTIHDLNLA SALCDELLLM SRGRLEASGS PAEVLTETML ASVFGVCTTV
KPHPQHGRPL IHYYYGYNGR TASQEKEEVS L