Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0746 |
Symbol | |
ID | 4602999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 918563 |
End bp | 919456 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639780081 |
Product | DMT family permease |
Protein accession | YP_926624 |
Protein GI | 119773884 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA CCCAACAAAA CCTGCCTCAC CGCTGGAATA GCCGATTGTG GTTTTTGACC GCATTGACCA TGTTGGCCTT TGCCGCCAAC TCTTTGCTGT GCCGCGAGGC GCTGGCATCG GGCAGCATAG ACGCCGCCAG TTTTACCCTG GTTCGTATGG TCAGTGGCGC TGTGGTGCTG GCGGTGTTGG CCCTGATGCA GGTTAAGGGG CAGGCTCTCG CAGGTAATTG GCGCTCCGCC ACTGCCTTGT TGGGATATGC AGTCGCTTTC TCCTTTGCCT ATCACAGCCT GAGCACAGCC ACCGGCGCCC TGGTGCTCTT TGGTGCGGTG CAGGGTTCCA TGATTGGTTT TGGCTTCTGG TCCGGGGAAA GATTGGGCCC GTTGCAAATG TTCGGTGTCG TACTTGCCAT GGTGGGGCTG GGATGGTTTT TACTCCCGGG CGTTACCTCT CCGGACCCAT TTGGTGCAGC GCTGATGCTG CTTGCCGGTG CTTGTTGGGG GGCCTATTCC CTGTTGGGAC GAGGAGTAGC ATCGCCTTTG GCAGCCACGG CGGGCAACTT TGTCCGCACC GTGCCACTGG CTCTGGTGCT CTATGGACTC TTCGCATTAA CCGGTCTTTC CGATGGGGCT GGGCAGGGAA TCAATCTCTC CGGCATGGGA GTGGTCTATG GCCTGGCCTC GGGGGCTTTG GCATCAGGGC TTGGTTACGC ACTCTGGTAC TCGGTGCTGC CACAGCTTGA AGCCACCACG GCCGCTACTG TGCAGCTCAG TGTGCCCATT ATCGCGGCCT TCGGTGGCTG GTTGCTCCTT GGTGAGGCAA TGAGTTTACG GCTCATTGTC AGCGCTTTTG CTGTGCTGGG TGGTATAGCT CTGGTGGTTA GGTTGAGGCG CTAA
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Protein sequence | MNNTQQNLPH RWNSRLWFLT ALTMLAFAAN SLLCREALAS GSIDAASFTL VRMVSGAVVL AVLALMQVKG QALAGNWRSA TALLGYAVAF SFAYHSLSTA TGALVLFGAV QGSMIGFGFW SGERLGPLQM FGVVLAMVGL GWFLLPGVTS PDPFGAALML LAGACWGAYS LLGRGVASPL AATAGNFVRT VPLALVLYGL FALTGLSDGA GQGINLSGMG VVYGLASGAL ASGLGYALWY SVLPQLEATT AATVQLSVPI IAAFGGWLLL GEAMSLRLIV SAFAVLGGIA LVVRLRR
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