Gene Sama_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0746 
Symbol 
ID4602999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp918563 
End bp919456 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content59% 
IMG OID639780081 
ProductDMT family permease 
Protein accessionYP_926624 
Protein GI119773884 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CCCAACAAAA CCTGCCTCAC CGCTGGAATA GCCGATTGTG GTTTTTGACC 
GCATTGACCA TGTTGGCCTT TGCCGCCAAC TCTTTGCTGT GCCGCGAGGC GCTGGCATCG
GGCAGCATAG ACGCCGCCAG TTTTACCCTG GTTCGTATGG TCAGTGGCGC TGTGGTGCTG
GCGGTGTTGG CCCTGATGCA GGTTAAGGGG CAGGCTCTCG CAGGTAATTG GCGCTCCGCC
ACTGCCTTGT TGGGATATGC AGTCGCTTTC TCCTTTGCCT ATCACAGCCT GAGCACAGCC
ACCGGCGCCC TGGTGCTCTT TGGTGCGGTG CAGGGTTCCA TGATTGGTTT TGGCTTCTGG
TCCGGGGAAA GATTGGGCCC GTTGCAAATG TTCGGTGTCG TACTTGCCAT GGTGGGGCTG
GGATGGTTTT TACTCCCGGG CGTTACCTCT CCGGACCCAT TTGGTGCAGC GCTGATGCTG
CTTGCCGGTG CTTGTTGGGG GGCCTATTCC CTGTTGGGAC GAGGAGTAGC ATCGCCTTTG
GCAGCCACGG CGGGCAACTT TGTCCGCACC GTGCCACTGG CTCTGGTGCT CTATGGACTC
TTCGCATTAA CCGGTCTTTC CGATGGGGCT GGGCAGGGAA TCAATCTCTC CGGCATGGGA
GTGGTCTATG GCCTGGCCTC GGGGGCTTTG GCATCAGGGC TTGGTTACGC ACTCTGGTAC
TCGGTGCTGC CACAGCTTGA AGCCACCACG GCCGCTACTG TGCAGCTCAG TGTGCCCATT
ATCGCGGCCT TCGGTGGCTG GTTGCTCCTT GGTGAGGCAA TGAGTTTACG GCTCATTGTC
AGCGCTTTTG CTGTGCTGGG TGGTATAGCT CTGGTGGTTA GGTTGAGGCG CTAA
 
Protein sequence
MNNTQQNLPH RWNSRLWFLT ALTMLAFAAN SLLCREALAS GSIDAASFTL VRMVSGAVVL 
AVLALMQVKG QALAGNWRSA TALLGYAVAF SFAYHSLSTA TGALVLFGAV QGSMIGFGFW
SGERLGPLQM FGVVLAMVGL GWFLLPGVTS PDPFGAALML LAGACWGAYS LLGRGVASPL
AATAGNFVRT VPLALVLYGL FALTGLSDGA GQGINLSGMG VVYGLASGAL ASGLGYALWY
SVLPQLEATT AATVQLSVPI IAAFGGWLLL GEAMSLRLIV SAFAVLGGIA LVVRLRR