| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0736 |
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| Symbol | |
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| ID | 4602989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 903625 |
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| End bp | 904713 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780071 |
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| Product | hypothetical protein |
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| Protein accession | YP_926614 |
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| Protein GI | 119773874 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[COG3809] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AATTAACCTG TCCCGGCTGC CAGCATCAGA GTTTCAGGGT GTTTGATTTT
CACGGTGAGC AGGTGGATAC CTGCGACAAG TGTGCCGGTC TCTGGTTTGA AAATGGTGAA
CTGGACCGGG CGCTGTCCTC GGCCGACAAC GGCGATGATG CCGTAGTGCT TGAGCAGTCC
ATGGGGGCGC ATCTGGGGTG CTCAGAACGT CGCTGTCACG ACTGCGGCTC CTCTCTGGAG
CGCTATCACC TGATGCAGGA GTTTGAAATC GAAATTGACG TATGCCCCTC TTGCCGCGGT
GTCTGGCTCG ACAAGCATGA GTGCGACAAG GTGGTGCAGT CTCCCCGGGT TCGTCAGGCA
TTGGCAGAGC TTGATGGCAA AATCAGTGTC AAAACCTGGC TGTTCCAGTT TTTGTCGCAA
ATGCCGGTGG AGTTCAATCT CAAACCCAAA ACCAAACCCG TGGTGACCTG GTGGCTGCTG
GGATTGAATT TGGTGATTTT TGGGATTTAT GGTTTCGACT TGTCGATGAT AGATCCCATC
TTCGAGCAGT TTGCCCTCGT ACCGAATCAG GTGATGCACG GCAGCCATGT GTGGACCCTG
TTCAGTCATA TGTTCCTCCA CGGCGACATC ATTCACCTCG CGGGCAACAT GTACTTCCTC
TACGTGGTGG GCGACAACCT GGAAGATGCC CTTGGTCGGG CGCGCTTTTT GGGACTGTAT
CTGGTGTGTG GTCTCGCGGC TGCGGCCGCA CAAATCATCT CCGAGCCCGG CAGCGATATC
TACATGGTGG GCGCCAGCGG TGCCATTGCC GGCTTGTTCG GCATGTACCT GCTGTGGTTC
CGCTATGCCA GCCTGACCTT TATGTTCATC GTGTTTCAAA AGAAGGTGTC ACCTCTGGTG
TTCTTCGGCA TTTGGCTCGC ATTGAACATC TTCGGTTTGT ATATGGCGGG TGAGGGCGTG
GCTTACTGGG CCCATATAGG CGGTTTTGTG GCGGGGCTTA TCATCGGCAA GCTGATGTAT
ACCAGCGTGA TGGCAGCCAA CCCCATGCTG GCGCTGATGA ACTCCCCTGA GGTCAGGGTC
AGCCGTTAA
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| Protein sequence | MKKQLTCPGC QHQSFRVFDF HGEQVDTCDK CAGLWFENGE LDRALSSADN GDDAVVLEQS
MGAHLGCSER RCHDCGSSLE RYHLMQEFEI EIDVCPSCRG VWLDKHECDK VVQSPRVRQA
LAELDGKISV KTWLFQFLSQ MPVEFNLKPK TKPVVTWWLL GLNLVIFGIY GFDLSMIDPI
FEQFALVPNQ VMHGSHVWTL FSHMFLHGDI IHLAGNMYFL YVVGDNLEDA LGRARFLGLY
LVCGLAAAAA QIISEPGSDI YMVGASGAIA GLFGMYLLWF RYASLTFMFI VFQKKVSPLV
FFGIWLALNI FGLYMAGEGV AYWAHIGGFV AGLIIGKLMY TSVMAANPML ALMNSPEVRV
SR
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