Gene Sama_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0731 
Symbol 
ID4602984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp899468 
End bp900898 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content59% 
IMG OID639780066 
Productbifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
Protein accessionYP_926609 
Protein GI119773869 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTA CGCTGCCAGC TTTTGAGAAG GCCCGGGTTT TGGTTGTTGG GGATGTGATG 
TTGGACCGCT ACTGGGTGGG ACCGACCGGA CGTATCTCCC CCGAAGCCCC TGTGCCCGTG
GTGCGCATCA ATCAGATTGA AGACAGGCCA GGCGGCGCTG CCAACGTGGC GCTGAACATC
GCGGCCCTGG GTGGCAAGGT ACAGCTCTCA GGCCTTGTGG GACAGGATGA TACCGCAGAT
GCGTTGACCC GCGGGGTGCA GGCACTTGGC GTAGAACCCC ATTGGTTGGT GGTGGAAGAT
AAGCCGACCA TCACCAAGCT CAGGGTGTTG TCCCGCAACC AGCAGCTTAT CCGACTCGAC
TTTGAAGAAG CCTTCGACAA ACACAGCAGT GACGCGCTGC TGAATCAAGC GCAAGCCCGG
CTCGATGACG TGGACGTGGT TATCCTGTCG GACTATGCCA AGGGCGCCGT GGGTGAGCCC
GCCGACTTTA TTGCCAGCGC CCGCGCCAAA GGGGTGAAGG TACTGGTGGA CCCGAAGGGC
AGTGACTTTG CCCGCTACCG TGGCGCAACC CTGCTGACTC CGAACATGAG CGAATTTGAA
GCCGTGGTAG GGACTGTCAC CAGTGAAGCG GATCTGGTTG ATAAGGCCCA AAAGCTGCTT
CAGGATCTGG CCTTGGATGC GCTGCTGGTG ACCCGCTCCG AAAAGGGTAT GACCCTGATT
ACCCCCAATG CGCCCGAGCT GCATATTCCC ACCGTTGCCC GTGAGGTGTA CGACGTCACT
GGTGCCGGTG ATACCGTGAT TTCGGCGCTG GCGACGGCTC TCGGCGCTGG CGCTGAGCTG
CCGCAGGCCT GTGCCATCGC CAATACCGCT GCCGGTGTGG TGGTGGGCAA GCTGGGTACC
TCAACAGTAA GCCGTATTGA ACTGATTGAA GCCCTGAAAT CCCATCAGGG TGAGTCTGGC
ATTGGCGTGG TCAGTGAAGA TCAACTGGTG TATGCCCTGG AGCAGGCCAA ACTTCGTGGT
GAGCGGGTGG TCATGACCAA CGGCTGTTTT GACATTCTCC ACGCAGGCCA TGTGAGTTAT
CTGGCTCAAG CCAAGGCGCT CGGCGATCGC CTGATAGTGG CCGTGAATGA CGATGACTCT
GTGCGCCGTT TGAAAGGGGA TGGCCGTCCT GTGAACTCAG TCGATCGTCG TATGGCGGTG
CTGGCCGGGC TTGCCTCGGT GGACTGGGTG GTGCCCTTCA GTGAAGACAC GCCCCAGCGG
GTTATTGCCA GACTCTTGCC AGACCTCCTG GTAAAGGGTG GCGACTATAA GGTGGAAGAC
ATTGCCGGTG GCGCCGAAGT GATTGCCAAT GGTGGCCAGG TGAAGGTGCT TGGTTTTGAA
GATGGGGTGT CGACCACAGC CATCATTCAG AACATCATGA GCCGCCACTG A
 
Protein sequence
MKVTLPAFEK ARVLVVGDVM LDRYWVGPTG RISPEAPVPV VRINQIEDRP GGAANVALNI 
AALGGKVQLS GLVGQDDTAD ALTRGVQALG VEPHWLVVED KPTITKLRVL SRNQQLIRLD
FEEAFDKHSS DALLNQAQAR LDDVDVVILS DYAKGAVGEP ADFIASARAK GVKVLVDPKG
SDFARYRGAT LLTPNMSEFE AVVGTVTSEA DLVDKAQKLL QDLALDALLV TRSEKGMTLI
TPNAPELHIP TVAREVYDVT GAGDTVISAL ATALGAGAEL PQACAIANTA AGVVVGKLGT
STVSRIELIE ALKSHQGESG IGVVSEDQLV YALEQAKLRG ERVVMTNGCF DILHAGHVSY
LAQAKALGDR LIVAVNDDDS VRRLKGDGRP VNSVDRRMAV LAGLASVDWV VPFSEDTPQR
VIARLLPDLL VKGGDYKVED IAGGAEVIAN GGQVKVLGFE DGVSTTAIIQ NIMSRH