| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0730 |
|---|
| Symbol | |
|---|
| ID | 4602983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 898426 |
|---|
| End bp | 899373 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780065 |
|---|
| Product | lipid A biosynthesis lauroyl acyltransferase |
|---|
| Protein accession | YP_926608 |
|---|
| Protein GI | 119773868 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACAGA GCGAGCCCCA AGTGGTAGAA AGTGCCCAAT TTTCCAATCA CCTGTATCAC
CCCAAGTACT GGCTGTTATG GCTGGGTGTA GGATTGATGC GCGCCTTGTC GCTGCTGCCC
CTGCATTGGC AGATGTCCCT GGGTAAAGGG CTTGGCCAAC TGGTAAGGAT ACTGGCAGGC
AGTCGCAGCA ATACCGCCAG ACGTAATCTG GAACTCTGCT TCCCCAACAT GAGCGACGCA
GAGCGCGACG CCCTGTTTAA ACGTAACTTC GAAGAAACCG GCAAAGCCGT GTTCGATACC
ATTTGTGCCT GGTGGTGGAG CGATGAGCGT GTAAAGCAGC ATATGCACAT CAAGGGAACC
GAGCATGTGG AGCAAACCAT TGCCGCAGGT CAGGGGGTTA TCCTGTTTGC GGTACATTGT
TTGCCACTGG AAATGGGCGC ACGGATTTTT GGCCAGTTTC AACCCGGTGT GGGTGTATAT
CGCCCCCACA ACAATGCGGT GATGGAATAT CTGCAAGTGA AAGGACGTCT GCGCTCCAAT
AAGGGGTTGG TGCCCAAGCG CGATTTGCGT CAGATGGTGC GCTGTTTACG GAATGCCGAG
GTGATTTGGT ACACGGCCGA TCAGGATTTT GGCCGCTCTT CCGCTGTATT TATTCCCTTC
TTTGCCGTGC CGGATGCCGC CACCATTACC GGAGCCACCA CCCTGGCCAA GTTGGGCAAA
GCCAGGGTAC TGCCGTTTTT TGTGGAGCGG AACGCTGATG ATAAGGGCTA CAGCATTGAG
ATTTTGCCGC CGCTGGAAGA CTTTCCCGGT GAAGACGAAA CCGCCGACGC CATCCGTGGT
AATCAGGTGG TCGAATCATT GATTTCCCGC AATCTGCCAC AATACATGTG GCTGCATCGC
CGCTTCAAGA CGCGCCCGGA GCAGGATGCG CCTTCGCTCT ACAAGTAA
|
|---|
| Protein sequence | MQQSEPQVVE SAQFSNHLYH PKYWLLWLGV GLMRALSLLP LHWQMSLGKG LGQLVRILAG
SRSNTARRNL ELCFPNMSDA ERDALFKRNF EETGKAVFDT ICAWWWSDER VKQHMHIKGT
EHVEQTIAAG QGVILFAVHC LPLEMGARIF GQFQPGVGVY RPHNNAVMEY LQVKGRLRSN
KGLVPKRDLR QMVRCLRNAE VIWYTADQDF GRSSAVFIPF FAVPDAATIT GATTLAKLGK
ARVLPFFVER NADDKGYSIE ILPPLEDFPG EDETADAIRG NQVVESLISR NLPQYMWLHR
RFKTRPEQDA PSLYK
|
|---|
| |