Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0721 |
Symbol | |
ID | 4602974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 885318 |
End bp | 886166 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780056 |
Product | cell shape determination protein CcmA |
Protein accession | YP_926599 |
Protein GI | 119773859 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.511119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG GACAAGGGAT CACATTTATT GGCGCCGGAA CCCGGCTTGA AGGCGAGATG ATGCTGGAAA GCGCGGCCTT GGTATCGGGC GAGTTGCACG GACGGGTGAG CTCCAAAGGC CAAATAAAGA TAGAGCAGGG TGGCCTTATC GAGGGGGAAC TCACCTGTCA TGAGCTGAAT GTCAGCGGCA CCTTCAGGGG TAAACTCAGC TGCCAAAAAT TGACCATCAT CGCTGGTGGC GTCGTGGAAG GTGAGGTGGC CAGTAATCAG ATGGAAATCT TCGAAGGCGG CCAGTTTATC GGCAGTCGAA AGCGTGGCCC TGAGCCTGTT GAATTGCCTG CGGGCACAAA GGCGAGCTTG CCAACAGAGG GCCGTAAGGG GCATTTAAAG TTGGTGCTCG GTATCGCTGC GGCGCTTGGG CTTGGATATC TGGTGACTCA AACCGGCTTC ATTCAGGGGA TTAAAGATGG GTATCAGGCC GGCAGTGCTG CCCGCTCGGA AATGAAAGAA CAGGCCCAGG CGCCCTCACA GGAACACCAG AGTCAGGCAC TGATGGCGAC GGCCGCTGAC GGCGATGCAT CAGGCTTGGC AGCAGAAAAC ATCAATGCTC AGGCCGGTGA CTACTTTGCC GAAGACACAG ACGCCATGGA AGCGGGCAAT GCGCTGCTGC TGGAAAATGG CTTTGATGCC GGGGTGACAA AAACCGATAC GGATGGGGCA GATGACGCTC AGCCTGCGGC GCTGGAGCCC GGTGCGCAAA GTCGCCCACT GACCCCGGAC AGCGACACCA GTGCCCTTAA TACCCAGGGG GCGTCAGATT TGCCTGCAGC ACCCGCTAAT CGTATGTAA
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Protein sequence | MSKGQGITFI GAGTRLEGEM MLESAALVSG ELHGRVSSKG QIKIEQGGLI EGELTCHELN VSGTFRGKLS CQKLTIIAGG VVEGEVASNQ MEIFEGGQFI GSRKRGPEPV ELPAGTKASL PTEGRKGHLK LVLGIAAALG LGYLVTQTGF IQGIKDGYQA GSAARSEMKE QAQAPSQEHQ SQALMATAAD GDASGLAAEN INAQAGDYFA EDTDAMEAGN ALLLENGFDA GVTKTDTDGA DDAQPAALEP GAQSRPLTPD SDTSALNTQG ASDLPAAPAN RM
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