| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0709 |
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| Symbol | |
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| ID | 4602962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 871986 |
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| End bp | 872837 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780044 |
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| Product | putative type II secretion system protein F |
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| Protein accession | YP_926587 |
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| Protein GI | 119773847 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATG TGATGCTCGC CATGGTCCTG GCCTTTGTCT CAGTCACAGT GCTGGTGTGG
TCTGCCAAGC ATCTGGGTGA GTCGCTGGCC AAACGATACC GGGAAACCTT TACCACCTCG
GCCAGTACCA ATCTGGCCGA CATGTTCCTG TTCATTGAGC CGGGCCAGCT GTTTTTGCTG
AACGTGCTGA CCCTGGTCTC AGTGCCTTTC TTCGGCCGCC TGTTCTTTGG CTCATGGGTG
GTAGGGATAT TGCTCAGTGT GCTGTTGGCA CTCTTGCCCC GTTATCTCTA CCGCTATCTG
CATCAAAGGC GCAGACGCAG GTTTGTGCAC CAGTTACCGG ACGCGCTGAA TATGATTGCG
GCGTCGATGC AGGCGGGTGC CAACGTGACC AATGCCATCG AGTTTATGGC CGATGAAATG
GATGCGCCCA TCAAGCAGGA GTTCCAGTTG TTTTTGCGTG AGCAGCGGCT GGGGGTGGAG
TTCAACACGG CGCTGGATAA CGTCTACAAA CGCATCCCCG AGAGCGAGTT TCAGCTGGTC
GTTGCAGGGA TGCAAATCTC CCGCGATGTG GGTGGCAACC TGGCCGAGGT GCTGGTGCGG
CTGTCTGAAA CCCTGCGTAA AAAAATCGAG ATGGAAGGCA AGATCACCTC GCTCACCTCA
CAGGGCAAGA TGCAGGGCAT AGTCATGACC CTGTTGCCGG TTGCGATCGG CTTCACCCTG
TATCATATGG AGCCTGTATC CATGGGACGA ATCTTAACCG AGCCCGTGGG CTGGGCCGTG
ATAGCCGTGT CGTCCCTGTT GCTCTTTGGT GGTTACATGA CCATCAAGAA AATCATCACC
ATCGATGTGT AG
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| Protein sequence | MGDVMLAMVL AFVSVTVLVW SAKHLGESLA KRYRETFTTS ASTNLADMFL FIEPGQLFLL
NVLTLVSVPF FGRLFFGSWV VGILLSVLLA LLPRYLYRYL HQRRRRRFVH QLPDALNMIA
ASMQAGANVT NAIEFMADEM DAPIKQEFQL FLREQRLGVE FNTALDNVYK RIPESEFQLV
VAGMQISRDV GGNLAEVLVR LSETLRKKIE MEGKITSLTS QGKMQGIVMT LLPVAIGFTL
YHMEPVSMGR ILTEPVGWAV IAVSSLLLFG GYMTIKKIIT IDV
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