| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0706 |
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| Symbol | |
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| ID | 4602959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 868003 |
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| End bp | 868899 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780041 |
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| Product | Flp pilus assembly protein CpaB-like protein |
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| Protein accession | YP_926584 |
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| Protein GI | 119773844 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCGA AACGCATAGA CTTTAACTGG GTCTTGCTGG GGATAGCTTT GGTGCTGGGT
AGCCTGGCGG CCTGGGCAAC AAAGAACTAT TTCATTGTTA AAGAACAGGA AATCCGGGCA
GAGCTGTCAA ACAGCAATGT AAAAATGGTG GATGTGGTGG TCGCCACCCA GGAACTGCGT
AAAGGCGACA TCGTCGATGA AACCAATATG TCGGTTCGCT CTATCCGTGC CGATGTCATC
CCACTGGATG CGATTCGCCC ATCCCAATTC AATGAAGTGG CAGGTCAGAT GTTGCTGAGC
GAAATGTCTC CTGGGCGGCC GCTTATCAGT GCTTATCTAC CCGGCTTCAA AACCAGGCAG
TTTTCAGATC TGCTACAGGA AGGCCAGCGC GCCGTCACGA TCGACATCAA TGAAGAAAAC
TCGACGGCGG GCATGTTGGT GCCCTCGGAT CTGGTGGATC TTTTCCTCAG CTACACAGTG
GAAAACGGTG ACAGCGAAAG GGTCAAGATG GAGCTCTTGA TTGAAAAGGC TCAGGTTTTG
GCTACGGGCA AGCGCAGCAT AGATGTACAT CCCGAGCTGG TGAACTCCAT TTACGACAAC
CCGGATTCTT ACAACACAGT TACCCTGGCG CTGTCCACCG AGGATGCGAT TCGGGTCTCC
CTTGCCAAAG GCCGTGGCAA ATTTGTCACC TTGCTGCGCA ACAAAGCCGA GTCCGCCCCC
GTTGCCGTGA CCAATATGTT TGGCGATCAG ATTTTTGGTA TGTCCGGCGA CAAAGGTAGC
CATCAGGTTG AATACATCAC AGGGGGAGGT GGACTCAAGA GCAGCTTCCA GGAATACCCC
TTACCAAAAG AATTGATGGA CGAATTAGCT CAGGGAAAAG TTAACACCGC ATTATGA
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| Protein sequence | MQSKRIDFNW VLLGIALVLG SLAAWATKNY FIVKEQEIRA ELSNSNVKMV DVVVATQELR
KGDIVDETNM SVRSIRADVI PLDAIRPSQF NEVAGQMLLS EMSPGRPLIS AYLPGFKTRQ
FSDLLQEGQR AVTIDINEEN STAGMLVPSD LVDLFLSYTV ENGDSERVKM ELLIEKAQVL
ATGKRSIDVH PELVNSIYDN PDSYNTVTLA LSTEDAIRVS LAKGRGKFVT LLRNKAESAP
VAVTNMFGDQ IFGMSGDKGS HQVEYITGGG GLKSSFQEYP LPKELMDELA QGKVNTAL
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