| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0689 |
|---|
| Symbol | |
|---|
| ID | 4602942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 853533 |
|---|
| End bp | 854003 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780024 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
|---|
| Protein accession | YP_926567 |
|---|
| Protein GI | 119773827 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTTG CCCTCGCTGT TATTGTGATT GCCTGCGTCA TTTTTTACTT TTTCACCACC
ATGAATAATC AAAAGGCCGC CAAGCTCAAT GAAGAGAAAG GCGCCGTCTT CCTCGCTGAA
AACGCCAAGC GTGACGGTGT AACCACCACG GCATCGGGCC TGCAGTATGA GCTTTTGATT
GCCGGCAGTG GCGAACGTCA TCCCAGTGCC AGCGACACTG TGCGCGTGCA CTATCACGGC
ACCCTGACCG ATGGCACTGT GTTCGACTCG TCAGTTGAGC GTGGTGAGAG CATTGCCTTC
CCGCTGAATC GGGTTATCAA GGGCTGGACC GAAGGCGTGC AACTGATGAA AGAAGGTGAC
AAGATGCGCT TTTTCATCCC GGCAAGCCTG GGTTACGGCA ACCGTAGCGT AGGCAAAATC
CCCGGTGGTT CTGTGCTGAT TTTCGATGTG GAACTGATAG CCATCGAATG A
|
|---|
| Protein sequence | MRVALAVIVI ACVIFYFFTT MNNQKAAKLN EEKGAVFLAE NAKRDGVTTT ASGLQYELLI
AGSGERHPSA SDTVRVHYHG TLTDGTVFDS SVERGESIAF PLNRVIKGWT EGVQLMKEGD
KMRFFIPASL GYGNRSVGKI PGGSVLIFDV ELIAIE
|
|---|
| |