| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0638 |
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| Symbol | |
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| ID | 4602891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 794055 |
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| End bp | 795434 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779973 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_926516 |
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| Protein GI | 119773776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.044891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAAC GGGCCCCAGT ACTCATGACA GCGCTCTTCC TTGGCGGCTG CGCCATGGGC
GGCTTCTTTA TGAGTTATCC GGCGCAGATG GCACAGGTAA AGCAAGCCCT TTCGGGCCCA
ACACCCCTGT CGCCGTTGAC ACAAATGAGC TCTGAGCTCA GCGGCAAAGA TGGCCTGCTC
TATGCGCAGG AAGCGGGACG GGTCGCCCAG ATCGGAGGCG ACTTTAAGGC AAGCCAGGAC
TATTACCGCA GTGCCATTGC GGCCTATGCC AAATTCGACG ACCAGGCCAC CGTCAGCCTC
AGCAACCTCG GTGCCAATGC CGGCAGTCTG GTATTGAATG ATAATGTTAT TCCCTACCGG
GGGCCGGGAT TTGAGCGTGT GATGCTACAC CAGTATCAGG CGCTCAATTA CCTGATTCAA
TACGACTTTG AAGGGGCTCT GGTGGAGGTG CGCCGGGCCA ACGAATTACA GGCGCAGGAG
CAAAAACGCT ATGAAAAATC CAAAGAGTCC GTCAAGGCCA TGGCCAACGG AACCGTGGAT
AGTGAAATAA ACCGCCTCGA ACAGCAGGCA GGTCAGGTCA CCAGTTCTTT CTTAAATGCC
TACAGCTACT ACACCACAGG CCTTATCCAT GAACTCCTGG GTGAAGAAAA CGACGCCTTT
ATCGATTATC GCAAGGCCGC TCAAATCCTC CCGGGTAATC CATACCTGGA GCAGGATTTA
GTGCGTTTGG CCAAAAAACT CGCCATGCCT CAGTATGAGG AATTTAAAGA CAGGTTCGGC
GACGCCATAT TGCCCGGCCA ACAGGACGGT CAACTGGTAC TGCTGCTGGA GCGAGATTTT
GTGTTGGCCA AGCAGCCACT GACAGTCCCC TTTACCATCA GCGGTAACTG GCAAACTGTG
TCGCTGCCAA CCTATGGCAG CAGTGGTCCT GCGCCTCAAC CCCTCAGTCT GATGGGACTG
GATACCCCCT TGCAACCGGC GACCATCACC AACATTGATG CACTCGCCAT CAATGCCCTT
AAAGAGGACT TGCCCGCGCT GCTCATTCGC CAGGCTGCCC GGGTCTATGC CAAATCAGAG
CTGACCCGCG GTGTGGAAAG CCAAAGCAAA AAACGCCGGG ACGAATTTGA TGGCGCCGCC
GTGGCCATGC AGATTTTTAA TGTATTAAGC GAACAGGCCG ATTTACGCAG CTGGTTGACC
CTGCCAAAAC AGGCACAGAT TGGCCGCCGG TTTTTACCTG AGGGCGATTA CAGTGTTACC
CTTGGCAATG CCAGCAGGAA CATAGAGATA CGTCCCGGAC AGACCACCCT GGTATGGGCG
ATTGACACGG GCAGCAACAT CCGCTTTTAT TCAATCAACA TCAAAAGTAA ATGGAACTGA
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| Protein sequence | MSQRAPVLMT ALFLGGCAMG GFFMSYPAQM AQVKQALSGP TPLSPLTQMS SELSGKDGLL
YAQEAGRVAQ IGGDFKASQD YYRSAIAAYA KFDDQATVSL SNLGANAGSL VLNDNVIPYR
GPGFERVMLH QYQALNYLIQ YDFEGALVEV RRANELQAQE QKRYEKSKES VKAMANGTVD
SEINRLEQQA GQVTSSFLNA YSYYTTGLIH ELLGEENDAF IDYRKAAQIL PGNPYLEQDL
VRLAKKLAMP QYEEFKDRFG DAILPGQQDG QLVLLLERDF VLAKQPLTVP FTISGNWQTV
SLPTYGSSGP APQPLSLMGL DTPLQPATIT NIDALAINAL KEDLPALLIR QAARVYAKSE
LTRGVESQSK KRRDEFDGAA VAMQIFNVLS EQADLRSWLT LPKQAQIGRR FLPEGDYSVT
LGNASRNIEI RPGQTTLVWA IDTGSNIRFY SINIKSKWN
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