Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0621 |
Symbol | |
ID | 4602874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 775291 |
End bp | 775698 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639779956 |
Product | hypothetical protein |
Protein accession | YP_926499 |
Protein GI | 119773759 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.2697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCG TGATTTCTGC CATCCTTTTA TGCCTGACCG CCATGCAGGC CTGGGCCGGT GTTGCCGTGA TAGTGCATCC TGCTAATGGT GACGCTATTG ATAAAAAGGC GATTGAGAAT ATTTATTTGG GAAAAACAAA GTCCTTCCCC GGCGGCAGTC AGGCGGTGCC GGTCAACATA GAGTCCGGGC CGATTCGGGA AACCTTCGAC AGCAACGTAC TTGGCAAGTC ATCCAGTCAG CTCAAGTCGT ATTGGTCTCA GAAGGTCTTT ACAGGAAAGG GTACGCCCCC CAAGGAAGTG GCCAGCGCCG AAGAAGTGCT GGGGCTGGTG TCCTCCAACC CCAACATTAT TGGCTATATT GATAGTAGTC AGGTAAATGG CTCGGTAAAG GTGGTTGCTG AGTTCTAA
|
Protein sequence | MKIVISAILL CLTAMQAWAG VAVIVHPANG DAIDKKAIEN IYLGKTKSFP GGSQAVPVNI ESGPIRETFD SNVLGKSSSQ LKSYWSQKVF TGKGTPPKEV ASAEEVLGLV SSNPNIIGYI DSSQVNGSVK VVAEF
|
| |