Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0611 |
Symbol | |
ID | 4602864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 763431 |
End bp | 765212 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779946 |
Product | fumarate reductase flavoprotein subunit precursor |
Protein accession | YP_926489 |
Protein GI | 119773749 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.755689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGG GAGCGATGAA AAAAACGGTA CTGGCGGCAC TGATCTCCGG GATCATGGCG GGCACTGCAT GGGCGGGTGC CGATAACCTG GCCGATTTCC ACGGTGATAA CGGCTGCGAC AGTTGTCACC AAAGCGATAA AGGTCCCAGC AACGATAATC TGACTTTTGA AAATGGTCAG TGCGTTAGCT GCCATGGCAG TCTTACAGAG GTAGCCGAAG GGGAGCGCGA AGGCATAGTC TCTCCACATA AATCACACCT GATAGGTGAT ATTGCCTGTA CCAGCTGCCA CAAAGGCCAC GAAAAGTCAG TTACTTACTG TGATGCTTGC CATAACTTCG GCTATGAGAT CCCCTTCGCC GGCAAGTGGG AGCGCAAATT TGTGCCCGTG GACGCCGACA AAGCCGCTCA GGATAAGGCC ATTGCCGCAG GTCCCCGTGA AACCACAGAT GTGGTCATCA TAGGTTCCGG TGGTGCAGGG CTTGCGGCCG CTGTTTCTGC CCGCGATGCC GGTGCCAAGG TCGTGGTGCT TGAAAAAGAA CCCGTTCCCG GTGGTAATAC CAAGCTTGCT GCCGGTGGTA TGAATGCCGC CGAAACCAAG CCTCAGGCCA AACTGGGTAT TGTTGATAAA AAGCAGATCA TGATTGACGA CACCATGAAA GGTGGCCGCA ACATCAACAA TCCTGAGTTG GTACAGGTTC TCGCCAATAA CTCTTCCGAC TCTATTGATT GGCTGACAGC GCTGGGCGCC GATATGAATG ACGTTGGCCG TATGGGGGGC GCCAGCGTTA ACCGCAGTCA CCGTCCAACC GGTGGTGCCG GTGTGGGAGC ACACGTGGCG CAGGTTCTGT GGGACGCTGC TGTGGCCCGT GATGCCGATA TTCGCCTCAA CAGCCGTGTG GTTCGCATTC TCGAAGACGG TGCCGGTCAG GTGACCGGTG TGCTGGTACA GGGGGCCTAT ACAGGTTACT ACGTGATTAA GGCCGATGCT GTGGTGGTAG CCACCGGCGG CTTTGCCAAG AACAACGATC GCGTTGCCAA GTACGATGCC AAACTCAAAG GCTTTAAAGC CACCAACCAC CCCGGTGCCA CCGGTGACGG TTTGGATGTA GCCACCCAGG CCGGTGCTGA CACAGTGGAT CTGGAATACG TGCAGGCTCA CCCCACCTAC AGCCCTGTGG GCGGTGTGAT GGTGACCGAA GCCGTACGTG GTAACGGTGC GATTCTGGTT AACCGCGAAG GCAAGCGCTT CGTGAACGAA ATCACCACCC GTGATAAGGC ATCTGCCGCT ATCCTGGCCC AGAAAGGTGA GAGCGCGTAT CTGCTTTTCG ATGACTCTGT ACGTAAGAGT CTGAGCAAAA TTGAGGGTTA CGTGCACCTC AAGATTGTAA ACGAAGGCAA ATCGGTGAAG GAACTGGCCG ACAAGCTGGG TATGCCCGCC GCTGAACTCG AAAAAACCAT AGGGACTTAC AATGGTTTTG TGAAGAGTGG TAAAGATGAG CAGTTCGAGC GTGCCGACAT GCCACGTGAA CTGGCGAGCG CGCCTTACTA TGCCATTGAA GTTGCACCGG CTGTTCACCA CACCATGGGC GGTGTGAAGA TTGATACCAA GGCCGAGGTT GTGGGCAAAG AAGGCAAGCT CATCAGGGGC ATGTACGCTG CCGGTGAAGT AACAGGTGGT GTCCATGGTG CCAACCGTCT GGGCGGTAAC GCCATCTCCG ATATCGTGAC CTTTGGTCGT ATCGCAGGTG CCGAAGCGGC CAAGTTTGCC AAAGACAATT GA
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Protein sequence | MFTGAMKKTV LAALISGIMA GTAWAGADNL ADFHGDNGCD SCHQSDKGPS NDNLTFENGQ CVSCHGSLTE VAEGEREGIV SPHKSHLIGD IACTSCHKGH EKSVTYCDAC HNFGYEIPFA GKWERKFVPV DADKAAQDKA IAAGPRETTD VVIIGSGGAG LAAAVSARDA GAKVVVLEKE PVPGGNTKLA AGGMNAAETK PQAKLGIVDK KQIMIDDTMK GGRNINNPEL VQVLANNSSD SIDWLTALGA DMNDVGRMGG ASVNRSHRPT GGAGVGAHVA QVLWDAAVAR DADIRLNSRV VRILEDGAGQ VTGVLVQGAY TGYYVIKADA VVVATGGFAK NNDRVAKYDA KLKGFKATNH PGATGDGLDV ATQAGADTVD LEYVQAHPTY SPVGGVMVTE AVRGNGAILV NREGKRFVNE ITTRDKASAA ILAQKGESAY LLFDDSVRKS LSKIEGYVHL KIVNEGKSVK ELADKLGMPA AELEKTIGTY NGFVKSGKDE QFERADMPRE LASAPYYAIE VAPAVHHTMG GVKIDTKAEV VGKEGKLIRG MYAAGEVTGG VHGANRLGGN AISDIVTFGR IAGAEAAKFA KDN
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