Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0598 |
Symbol | |
ID | 4602851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 748603 |
End bp | 749136 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779933 |
Product | inorganic pyrophosphatase |
Protein accession | YP_926476 |
Protein GI | 119773736 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00625335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0259189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGA ATGCAGTGCC AGCGGGCAAA TCCCTGCCAG ATGATATCTA TGTAATCATC GAGATCCCAC AGAACCACGA TCCTATCAAG TACGAAGTGG ACAAGGACAG CGGCGCCCTG TTTGTTGACC GCATCATGAC TGCTCCTATG TTCTATCCTT GCAACTACGG TTATGTGAAC CAGACTCTGA GCCTGGATGG TGACCCAGTA GACGTACTGG TACCTACCCA GTACCCACTT CAGCCTGGCA GTGTGATCCG TTGCCGCCCT GTTGGCGTGC TGAAAATGAC CGACGAGTCT GGTGAAGACG CCAAAGTGGT TGCCGTTCCT CACGAGAAAG TGTCCAAAGA ATACGGCCAC ATTCAGGACG TGAACGACCT GCCAGCCCTG CTGAAGGCCC AGATCAAGCA GTTCTTCGAA CATTACAAGG ATCTGGAAGT TGGCAAGTGG GTGAAGGTTG AAAGCTGGGA AGACGCCGCT GCTGCCCGTG CAGAAATCCT CACCAGCGCC GAGCGCTACA ACAAGCAAGC CTAA
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Protein sequence | MSLNAVPAGK SLPDDIYVII EIPQNHDPIK YEVDKDSGAL FVDRIMTAPM FYPCNYGYVN QTLSLDGDPV DVLVPTQYPL QPGSVIRCRP VGVLKMTDES GEDAKVVAVP HEKVSKEYGH IQDVNDLPAL LKAQIKQFFE HYKDLEVGKW VKVESWEDAA AARAEILTSA ERYNKQA
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