Gene Sama_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0598 
Symbol 
ID4602851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp748603 
End bp749136 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID639779933 
Productinorganic pyrophosphatase 
Protein accessionYP_926476 
Protein GI119773736 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00625335 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0259189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGA ATGCAGTGCC AGCGGGCAAA TCCCTGCCAG ATGATATCTA TGTAATCATC 
GAGATCCCAC AGAACCACGA TCCTATCAAG TACGAAGTGG ACAAGGACAG CGGCGCCCTG
TTTGTTGACC GCATCATGAC TGCTCCTATG TTCTATCCTT GCAACTACGG TTATGTGAAC
CAGACTCTGA GCCTGGATGG TGACCCAGTA GACGTACTGG TACCTACCCA GTACCCACTT
CAGCCTGGCA GTGTGATCCG TTGCCGCCCT GTTGGCGTGC TGAAAATGAC CGACGAGTCT
GGTGAAGACG CCAAAGTGGT TGCCGTTCCT CACGAGAAAG TGTCCAAAGA ATACGGCCAC
ATTCAGGACG TGAACGACCT GCCAGCCCTG CTGAAGGCCC AGATCAAGCA GTTCTTCGAA
CATTACAAGG ATCTGGAAGT TGGCAAGTGG GTGAAGGTTG AAAGCTGGGA AGACGCCGCT
GCTGCCCGTG CAGAAATCCT CACCAGCGCC GAGCGCTACA ACAAGCAAGC CTAA
 
Protein sequence
MSLNAVPAGK SLPDDIYVII EIPQNHDPIK YEVDKDSGAL FVDRIMTAPM FYPCNYGYVN 
QTLSLDGDPV DVLVPTQYPL QPGSVIRCRP VGVLKMTDES GEDAKVVAVP HEKVSKEYGH
IQDVNDLPAL LKAQIKQFFE HYKDLEVGKW VKVESWEDAA AARAEILTSA ERYNKQA