| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0590 |
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| Symbol | |
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| ID | 4602843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 736305 |
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| End bp | 738518 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779925 |
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| Product | putative TonB-dependent receptor protein |
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| Protein accession | YP_926468 |
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| Protein GI | 119773728 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000188689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000190482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATAACTA TTGTCATTAT CGACAAAAAG GGAGACACCA TGACCACCAT CGCCAAGCCA
GCCATCAAGC TGAGCCTGCT GACCAGCGCC CTGCTGGCAA GCTTTGCCGC CACTGCAACC
GCCAATGCCG ACATCGAGCA GATCAGCATT TTCGGTAAAA AGAACCCCAT CAACACAGTG
CCAGGCAGCG CCCATCAGCT GAGCCAGGAA GAGCTGGATA CCTTCAAGTA TTCCGACATC
ATGCGCACCC TGGCCTCGGT GCCCGGGGTC TATATTCAGG AAGAAGAAGG CTATGGTCTG
CGCCCCAATC TTGGCATGCG CGGCACGGGT CAGAACCGTT CAGAAAAGAT CACCGTGATG
GAAGATGGCG TGCTGGCAGC ACCGGCGCCT TATGCTTCAC CAGCGGCCTA TTACTTCCCA
ACCTCCGGCC GCATGCAGCA AATTGAAGTG CTAAAAGGCT CTTCTACCGT GAAATACGGC
CCGCGCACCA CCGGCGGCGT GGTGAACATG GTTTCCCGCC AAATTCCTGA TGCCGAACTG
GCAGGCGCCC TCGATGTCGC CCTGGGGCAG GATGGCTATG GCAAGTTGCA CGCCCACGCC
GGTGGTCAGG GCGAACGCAT TGGTGCCGTA ACCGAAGTGT ACCGTTATCA GGCCGATGGT
TTCCGCGACA TCAACGGCGT TGGCGGTGAC ACAGGTTTTG TGAAAAACGA TCTGCTGGCC
AAAGTGGCCA TCGACAGCGC TAAAGATGCC AAATACGCCC AGCGTCTGGA ACTCAAACTC
AAGTATGCCG ATGAAGTCTC CGACGAGACC TACATGGGTC TGACTGACGA AGATTATGCC
GCCAAGCCAT TCAGCCGCTA CTCGGCCTCG CAAAAAGATG AAATGACCAC TGAGCACAAG
CAGCTGCAAC TGATCCATAT TATCGATTTC AGCAGTACTG TGAGTCTCGC TACTACGGCT
TATTACAACG ACTTTGCCCG TAACTGGTAC AAAGCCGACA AGGTAGATGG CAAGAGCCTG
TCCAAGGGTG GTATTGAGGC AGCCAGCGTC TTCGACGCCA ATCCCGAAGG GGCGATTGAT
GTCAGCGTGA AAGCTAACAA CCGGGTGTAT ATTTCTCAGG GCATTCAAAC CGAGCTGGGA
CTGCTCCTTG GCGATCACCA GTTGGATATA GGTGTGCGCC TGCATCAGGA CGAGATGGAC
CGCTTCCAGT GGGCCGATAC CTACAGTCTG GACGCCAATC AGCAGATGAG CCTGACCAAG
GCTGGTGTAC CTGGTACCGA CTCTAACCGT ATCGACAGCG CCGAAGCCCT GTCTGCTTAT
GTTCAGGACA GATTCACCCT GGGCGCCTTT ACTCTCACCG CCGGTGTGCG CTACGAAGAT
GTGACCGTGG AGCGCGAAGA CTGGGGCAAA GCCAACCCAG GCCGTAACGG CGATGGCGCT
TTTAAAGAAA ACAGCTTCTC GGCGCTGCTG CCATCACTGT CTGCCACCTG GCAGCTGACC
GACAGCACCC TGCTGCTGGC CGGCGTGCAA AAGGGCTTTG CCCCTGCGGC TCCCGGCAAC
ACCAACGGGC AAGAGGAAGA GAGCTGGAAC TACGAGGCGG GTACCCGTTT CGTGAACGGC
AACTTCAATG CCGAGGCTAT CGCTTTCTAC GGTGATTACA GCAACATGCA CGGCAACTGC
ACTGCCGCCC AGGGTTGTGA TGAAGACAAG CTGGACAACC AGTACAACGC CGGTGAAGTG
GTGGTGAAAG GTCTGGAATT GTCAGCTGGC TATCAATTCA ACACTGATGG CGCTTTGAGC
TTCCCGGTGA AGTTGGCGTA TACCTACACC AGTACGGAGT TCCAGAACAG TTTCGAGTCG
GAGTTTGAAA CCTGGGGTTC GGTACAGGTG GGTGACGAGT TCAGCTACAC CCCCAAGCAT
CAGCTGTATC TGAGCGCAGG CATCAGCGTC GAGCAGTGGC AGTTGACCCT GGCTGGCCGT
TACACCTCGG ATATGCGCGC CACCGCCGGT CAGGGCGACA TTGCCGCTGA CGACCTGATT
GCTGCCAAGA CCCTGGTTGA TCTATCCGGT CGTTACTTTA TCGATAAACA GCAGGAGGTT
TATTTGACCG TTGATAACCT GCTGGATGAA ACCTATATGA CGACCCGTGC CCATGGCTCG
GTGTTTTCTG GCAAGCCCAG AAGCATTACC GTTGGTTATT CCTACAAGTT CTAA
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| Protein sequence | MITIVIIDKK GDTMTTIAKP AIKLSLLTSA LLASFAATAT ANADIEQISI FGKKNPINTV
PGSAHQLSQE ELDTFKYSDI MRTLASVPGV YIQEEEGYGL RPNLGMRGTG QNRSEKITVM
EDGVLAAPAP YASPAAYYFP TSGRMQQIEV LKGSSTVKYG PRTTGGVVNM VSRQIPDAEL
AGALDVALGQ DGYGKLHAHA GGQGERIGAV TEVYRYQADG FRDINGVGGD TGFVKNDLLA
KVAIDSAKDA KYAQRLELKL KYADEVSDET YMGLTDEDYA AKPFSRYSAS QKDEMTTEHK
QLQLIHIIDF SSTVSLATTA YYNDFARNWY KADKVDGKSL SKGGIEAASV FDANPEGAID
VSVKANNRVY ISQGIQTELG LLLGDHQLDI GVRLHQDEMD RFQWADTYSL DANQQMSLTK
AGVPGTDSNR IDSAEALSAY VQDRFTLGAF TLTAGVRYED VTVEREDWGK ANPGRNGDGA
FKENSFSALL PSLSATWQLT DSTLLLAGVQ KGFAPAAPGN TNGQEEESWN YEAGTRFVNG
NFNAEAIAFY GDYSNMHGNC TAAQGCDEDK LDNQYNAGEV VVKGLELSAG YQFNTDGALS
FPVKLAYTYT STEFQNSFES EFETWGSVQV GDEFSYTPKH QLYLSAGISV EQWQLTLAGR
YTSDMRATAG QGDIAADDLI AAKTLVDLSG RYFIDKQQEV YLTVDNLLDE TYMTTRAHGS
VFSGKPRSIT VGYSYKF
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