Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0588 |
Symbol | |
ID | 4602841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 734310 |
End bp | 734819 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779923 |
Product | FMN-binding |
Protein accession | YP_926466 |
Protein GI | 119773726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00870871 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000120733 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGAAAT ACCTGCTGAC CCTGCTGGCC TGCTGGCCCT TGCTGGGGCA CACCGAAACC AGCTTTCAGA GTAATGAAGG CTTTATCGCC GATGCGCTGG GTGCAGTTCC CAAGGCCAGT GTGTTGTGGT TGGATGATAC CCAAAAGGCC AACATTGAGA ACATTCTTGC CCACGCCTAC AACAAACTCC GAGTAAGGTA CTGGCGCGAT GGGGCACAGA CGGTGTGGAT ACTGGACGAA ATCGGTAAAG AATCTCCTAT CACTGTTGGC ATCCACATCG CCAATCAACA GATAGTCAAA ACCAAGGTAC TGGTATACAG AGAAAGCCGC GGTGATGAGG TCAGGCATGA CTTCTTTACC AACCAGTTCA AATCGGCGAC ACTGACGCCC TCCCTTGAAC TGGATCGCAG TATCGATGGC ATCACAGGGG CAACCCTGTC GGTAAGAGCC CTGACCAAGT TGTCCCGGAT AGCCCTGTAT CTGGATGCTG CCGTGCAAAA GACCCCATAA
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Protein sequence | MKKYLLTLLA CWPLLGHTET SFQSNEGFIA DALGAVPKAS VLWLDDTQKA NIENILAHAY NKLRVRYWRD GAQTVWILDE IGKESPITVG IHIANQQIVK TKVLVYRESR GDEVRHDFFT NQFKSATLTP SLELDRSIDG ITGATLSVRA LTKLSRIALY LDAAVQKTP
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