Gene Sama_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0588 
Symbol 
ID4602841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp734310 
End bp734819 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID639779923 
ProductFMN-binding 
Protein accessionYP_926466 
Protein GI119773726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00870871 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120733 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGAAAT ACCTGCTGAC CCTGCTGGCC TGCTGGCCCT TGCTGGGGCA CACCGAAACC 
AGCTTTCAGA GTAATGAAGG CTTTATCGCC GATGCGCTGG GTGCAGTTCC CAAGGCCAGT
GTGTTGTGGT TGGATGATAC CCAAAAGGCC AACATTGAGA ACATTCTTGC CCACGCCTAC
AACAAACTCC GAGTAAGGTA CTGGCGCGAT GGGGCACAGA CGGTGTGGAT ACTGGACGAA
ATCGGTAAAG AATCTCCTAT CACTGTTGGC ATCCACATCG CCAATCAACA GATAGTCAAA
ACCAAGGTAC TGGTATACAG AGAAAGCCGC GGTGATGAGG TCAGGCATGA CTTCTTTACC
AACCAGTTCA AATCGGCGAC ACTGACGCCC TCCCTTGAAC TGGATCGCAG TATCGATGGC
ATCACAGGGG CAACCCTGTC GGTAAGAGCC CTGACCAAGT TGTCCCGGAT AGCCCTGTAT
CTGGATGCTG CCGTGCAAAA GACCCCATAA
 
Protein sequence
MKKYLLTLLA CWPLLGHTET SFQSNEGFIA DALGAVPKAS VLWLDDTQKA NIENILAHAY 
NKLRVRYWRD GAQTVWILDE IGKESPITVG IHIANQQIVK TKVLVYRESR GDEVRHDFFT
NQFKSATLTP SLELDRSIDG ITGATLSVRA LTKLSRIALY LDAAVQKTP