| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0580 |
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| Symbol | |
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| ID | 4602833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 720879 |
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| End bp | 725432 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779915 |
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| Product | acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase |
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| Protein accession | YP_926458 |
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| Protein GI | 119773718 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.539165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0467545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA ACAAGCAGCC CAAAAACATG ACTCAAGCAC AAAAGCCTGA TCCGCTGTTT
CTGCAAGCGG AACACCTGGC AAAGGATTTT TCGCTGTTCC CTGAGCACAG CAAACAAAGT
TTATCCGAGG AAATTAAAGG TCTGTTGGAC GATGCTGCCA TCCAGACTAA CCTCAAGTCT
CTGGCAAAAC TGGATGTGGA CGGCTATGTC GCCAAGGTCA TTCAGCCAAC CCAAGACAAA
AACCGCCCCG GCGCCAAGCG TATTATTGCC GATCTCAAGG GCAAGGTCAT CACCGAGACC
CACATGGGTT CTTTCTACAG CGCCGAAGTG GACCTGAATT TTGGCAGCCG TACCCGTCGT
ATCGGTTTTG TCGCCCAGGA GCGTACCACC GCCAATGGTG CCTGGATGCC TGAGCATCAC
CTGGCGGCCT GCAAGGCCAT TCGTCATTTC GCCGAATTGT CCATGCCCAT TGTTTACCTC
ATCGACACGC CCGGTGCGGA TGCCGGTGAG ATTGCCAACA GCAACAATCA GGCACACTCT
ATTTCCAAGG CCATCGCCGA GAGCGCCAAC GTTGACGTGC CCACTGTGGG TATCGTGATT
GGTGCCGGTT ATTCCGGTGG TGCGATTCCA TTGGCGGCAG CGAACATTCT GCTGTCTCTG
CGTGATGGTA TCTTCAACAC CATCCAGCCT CAGGGTCTGC AAAGTATTGC CCGCAAGTAC
AACCTTTCCT GGCAGGAATG TGCCAAGTCG GTAGGTGTGT CCCCAGAGGA ACTGTATAAC
GCCGGTTGCA TTGATGGCAT CATCGACTTC TCGCCTTCCG ACCGTGATGA GCGTCAACAC
AATCTTCGCC GCGCCATCAT CAGCTCCATC GAGGCCGTTG AGCGCGCTGC GGTTAATTTC
GTTAAAGAGT CCAAAGATCT GCGTGAGCAC TACGAGCGCA GTCTGACCCG CTTCCTTAAT
CCGTCAAACA GCCTCAAGGC ACTGGAAAGC ACGGCCGACA TGGCGGTGGC GAGCAGCCCC
ACCATGCACC TGAACCTCTT CGGCAGTGCC TACCGTTATT TGCGTTACCT GACGCTGCGC
AGCCGTATCC ACTCCATCTC CATGGAGCAA TATGGTCGTT TGTCCAAGGT GAGCGTGCCC
GAGGGTGACT TGCTGGAGCG TATTCAGAAA GAGCAGGAAA AGGTATTCCA GGCTTGGTTG
TCTGCCCCGG ATAAAGTGGT ATACGACGAA GAGCTGTCCA AGCTGTGGAA CAACTTTGTT
AACAAACGCA GCGAAGTCAG CACCGAGCGT AACATGCTGA CTCGTTTGAT TTTGGGTGAA
CCCAAAGAGA ACTACAAAAA GGCCAAAAAA GCGCTGCTGT TCAACATCGG CTGGTCTTTG
TACCATCGTT GGAAGTCCAA CGCTGCCAAC AACTTCAAGG GACTTATCCA TTATCTGGAA
ACCCTGCCTG CCGAGGTGAC CGAGGCCAAC TGGCCAGAGC TGAACAACCT CACTGTGCTG
GATGTGGTGG TGAACAAAGA ACTGCGCGAA GATTTTATTT GGCAGTGCTA CAACATCCTG
ATTTTCAATG CCCTGTACGA CAACGTGGTG GGCAGCCTGG CCTCTATCGC CAAAGAAGCC
ATGATGAGCA AGAGTCTGTC CCGTGCCTCG GTTGACAGCC TGCTGCACAA GGCCATTGAC
CGCGCCCTGT CGACCCAGGA CATCGCCAAC GACAAGAGCA AGTTCTACAA GTGGCTGAAG
TACTTCATGT CTCAGTCAAA CCGTGCCGAA CTGCTGACCA AAACCGAACA GTGGAAGAGC
GTGGGCTTCC CACAGCTCAA CGACTCGCTG TTCGTGATCC TGACGTACTT CTTTGAGCGT
CTGTTGCCCG AATACTTCGA CAGTGAAGAC GACACCGGTA AGTACACCGG AGCCATCAAC
CCTGTGCGTA TCGGTCGTCG TAAGGACTTC TGGAACCGCC TGACCATGGG TTATCAGGAT
CTGTTGATTC AGAAGGTGCT CCGCGACGAG AAGAAAGCTG GCAAGATGAC CTGGGAAAAC
GTCATCAACA AGTTCTTCAC CAATTTTGAT GAGCTGAACG GCGACAAGAT GACCGCCAAC
CTGCTCAACT TCCCAGGCTT CCGTCTGTCG ATTGAAGACG CGCTGGATAA GGGCATTCGT
CCTTGCGGCC TTATCACTGG TATGGCTGAC TTTGAGCACA AGGGTGCTTC ACTCAAGGTT
GGTATCGCCG TTTCCAACAC AGCCTTCCAG GCCGGTGCCT TCGATATGGC TTCAGCCGAG
AAGTTCTCTG CGCTGCTGAT TGAGTGTGCC AAGCGTCATA TGCCGGTTAT CTGCTTCATC
TCTTCCGGTG GTATGCAGAC CAAAGAAGGT GCGGCAGCCC TGTTCTCCAT GGCCGTGGTG
AACGACCGTA TTACCCGCTT TATCCGTGAC AACGAACTGC CAGTTCTGAT GTTCGGTTTC
GGTGACTGTA CCGGCGGTGC CCAGGCATCC TTCGTGACTC ACCCATTGGT ACAGACCTAT
TACCTGTCAG GCACCAATAT GCCGTTCGCC GGTCAGATGG TGGTTCCTGC CTATCTGCCG
TCCACTTCAA CTCTGTCGAA CTACTTGTCG AAGGTGCCGG GTGCCATGAA TGGCCTGGTG
TATAACCCCT TCAGCGACAC TCTGGATTCT CAGCTGTCCA GCATCGACCC TCTGATGCCA
ATGCCGACCC AGAAGATTGA AGAAGTCATC AAGGGCGCTA TCTCTACTCT GGTGCCTGAG
GCTCAGGTAG TGGACGAAGA AATCCGTCAG GATGACCCGC GCGCCCTGAT GAAGCCTATC
GACAAGGTGC TGGTACACGC CCGTGGCTGT ACCGCGGTGA AGCTTATCCG TAAGGCTCAC
GACAACAATA TCAACGTGGT GTTGGTGGCG TCCGACCCGG ATATGACTGC TGTGCCGGCC
GATATGCTGA AGGAAAATGA CAAGCTGGTG TGTCTGGGTG GTAACACCTC CGACGAATCC
TACCTGAACG CGTACTCTGT GCTGAAAGTG GCCGAATACG AAAACGTAGA CGCGCTGCAC
CCAGGTATCG GCTTCCTGTC TGAGAGCCCA CAGTTTGCTG CCCTGTGCGT AAACAATGGT
GTTAACTTCG TCGGTCCAAG CGTGCACTCC ATGACCACCA TGGGTAACAA GTCCAACGCA
ATCAAGACCT CTCAGGCGCA AAACGTACCC GTGGTTCCAG GCTCACACGG TATTCTGTCC
AACGCCGAAC AGGCGGTGAA CGTGGCCAGT GAAATCGGCT ACCCAGTGCT GCTCAAAGCG
GTACAAGGCG GCGGTGGTAA GGGTATCCAG GTGGTAAAAC GCCCAGAGGA TATGATCCCA
CTGTTTATGA AGACCTCTAC CGAAGCGGCT GCGGCATTCG GTAACGGTGA CCTGTACCTC
GAGAAGTACG TGACATCGCT GCGCCACATC GAAGTGCAGT TGCTGCGCGA CAAGTTTGGC
AACGCCAAGG TATTGGGTCT GCGTGACTGC TCGGTTCAGC GCAATAACCA AAAGGTGATT
GAAGAGTCAG GCTCTACCAT GCTGCCACCT GAGCTGAAGC AGCAGGTGAT GGCTTACACC
AAGTCGCTGG GTGATGCCGT GGACTACATG GGTGCAGGTA CTGTGGAGTT TATCTACAAC
CTGGATGCCA ATGAAGTTTA CTTCATGGAA ATGAACACCC GTCTGCAGGT AGAGCACCCT
GTGACTGAGG CCACCTCAGG TATTGATATT GTGTCTGCCC AGTTTGATAT CGCTGCGGGT
CGTTCCATCG AAGATCTGGA GCCTCAGGAA ATTGGTTACG CCATGGAAGT GCGTGTAACT
GCCGAGAAGG CCGCTCTGGA CAGCAATGGC GTACTGCAAC TGGTGCCAAA CCCAGGCAAG
ATCACCGAGT GCGTGATGCC AGAGCGTGAC GATGTGGAAA TTATCTCCAT CGCCGCCGAA
GGCAAGGAAG TATCGCCATA CTACGACAGC CTGATAGCCC AGATCATCAT CCGTGGTGAG
TCCCGTGAAG ACGTGGTCAC CAAGATGTAC GACTATCTGG ACAGCGTCGT GATTAAAGGC
ATTGCCACTA ACATTCCGCT GCTCAAGCGT ATCCTTAAGG ATGCCACCTT CAACGAAGGC
GTGTATGACA CCAACTACCT GCCTCGTCTG ATGGCTGAGC TGGATATCCC TGAGCTTATC
GCCGAGATGG AAGCTGCTGC CGAAACCCAG GGCGTGGATA CCGAGTCTCT GCGTGTGGGT
GACTCCAACG AGCTGAAAGT ATTGGCTCAG GGCGCGGGTA TCTTCTACAG CTCGCCTGCT
CCGGGTGAAC CTGAGTTTGT CCGTGAAGGT GACATTGTGA CCACCGACAC CACTCTGGCG
CTGACCGAAG CGATGAAGAT GTTCTCCCAG GTCACTCTGG CAAGCTTTAA CCGCAAGGGC
GCCGTGCTCT ATCCGGAAGA CAAGAAGTAT CGCATCGAGC GTATTCTGAA TACCAACGGT
CAACAGGTAT CTCAGGGCGA TCTGCTGTTT GTGGTCTCTC CTGTAGAAGA CTGA
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| Protein sequence | MTTNKQPKNM TQAQKPDPLF LQAEHLAKDF SLFPEHSKQS LSEEIKGLLD DAAIQTNLKS
LAKLDVDGYV AKVIQPTQDK NRPGAKRIIA DLKGKVITET HMGSFYSAEV DLNFGSRTRR
IGFVAQERTT ANGAWMPEHH LAACKAIRHF AELSMPIVYL IDTPGADAGE IANSNNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYN AGCIDGIIDF SPSDRDERQH NLRRAIISSI EAVERAAVNF
VKESKDLREH YERSLTRFLN PSNSLKALES TADMAVASSP TMHLNLFGSA YRYLRYLTLR
SRIHSISMEQ YGRLSKVSVP EGDLLERIQK EQEKVFQAWL SAPDKVVYDE ELSKLWNNFV
NKRSEVSTER NMLTRLILGE PKENYKKAKK ALLFNIGWSL YHRWKSNAAN NFKGLIHYLE
TLPAEVTEAN WPELNNLTVL DVVVNKELRE DFIWQCYNIL IFNALYDNVV GSLASIAKEA
MMSKSLSRAS VDSLLHKAID RALSTQDIAN DKSKFYKWLK YFMSQSNRAE LLTKTEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSED DTGKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KKAGKMTWEN VINKFFTNFD ELNGDKMTAN LLNFPGFRLS IEDALDKGIR
PCGLITGMAD FEHKGASLKV GIAVSNTAFQ AGAFDMASAE KFSALLIECA KRHMPVICFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMNGLV YNPFSDTLDS QLSSIDPLMP
MPTQKIEEVI KGAISTLVPE AQVVDEEIRQ DDPRALMKPI DKVLVHARGC TAVKLIRKAH
DNNINVVLVA SDPDMTAVPA DMLKENDKLV CLGGNTSDES YLNAYSVLKV AEYENVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQAQNVP VVPGSHGILS
NAEQAVNVAS EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIP LFMKTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVI EESGSTMLPP ELKQQVMAYT
KSLGDAVDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIEDLEPQE IGYAMEVRVT AEKAALDSNG VLQLVPNPGK ITECVMPERD DVEIISIAAE
GKEVSPYYDS LIAQIIIRGE SREDVVTKMY DYLDSVVIKG IATNIPLLKR ILKDATFNEG
VYDTNYLPRL MAELDIPELI AEMEAAAETQ GVDTESLRVG DSNELKVLAQ GAGIFYSSPA
PGEPEFVREG DIVTTDTTLA LTEAMKMFSQ VTLASFNRKG AVLYPEDKKY RIERILNTNG
QQVSQGDLLF VVSPVED
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