| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0578 |
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| Symbol | |
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| ID | 4602831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 718547 |
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| End bp | 719704 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779913 |
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| Product | hypothetical protein |
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| Protein accession | YP_926456 |
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| Protein GI | 119773716 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.056117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0560142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGC GTATGCTCCC TGCTCTGTTC ATTGCCGGTC TGGGCACTCT GCCCCTTTTG
GCACAGGCCA ATCTCGACGT GGAAGAACTG CGACTTCCCA AGGCAAACAG CGACCTCGGT
GAAGTAGCAA GCCGCTATCA GGGGCTGATT GACGGTCTCA AAGACAAACT GGCAGCCGGT
AACGAAGAAA AGGCCGTGAC CCAGGCGATG GCATATCAGG GCATTCGTCT ATGGCAGCAA
GCGGTGCGGG ATGTGCAGGC CGGTCATATC GATGATCGCA GTTTGTATTG GGCCAGACTG
GCTATGCGAA CCAGTTTGAA GCAGGACAAA GCAGGCTATG CCATTGTGCC CTGGCAAAGA
GACATTCTGG TGCGCGCCGT TGAAACAGCC TCCCGGGGTT TTTCGGATAT CCATTTTGGC
GACGATGTAC AAATTCGCAT TCTGCTTACC GGCTTTGACC CCTTCTTCCT CGACCGCAAC
ATAGGCCAGA GCAATCCGTC GGGTATCACC GCGCTGATGC TGGATGGCTA TAAATTTAAG
GTGGGCGGCA AGCAGGCACA AATCGAGACG GTGATGATCC CGGTGCGCTT TGCCGATTTC
GATCAGGGCA TGATTGAATC GCTGTTGACG CCCTTCTATC GCAAGCGGTC CATTGATGCG
GTATTTACCG TGAGCATGGG ACGCGATGAT TTCGACCTCG AACGTTTCCC CGGCCGCAAC
CGCAGCGCCG AGGCCCCGGA TAACCTGAAT GTACTGACCG GTGCCACCAA AACCCAACCC
ATAGCGCCCA TGCTGAACGG GAACTCACTC AACGGCGATG AATTTGTGGA ATTTTCTTTA
CCCGTAACAG CCATGCAGGC GGCACCGGGT AACTACAAGG TCAATGACAA TCGCAAGGTC
ACCACCCTGG GCAAAGGCAC CTTTGATGCG TCTTCCCTCG CTGAACTTCA AGAAGCCATT
TCGGTAGAAG GCTCAGGCGG CGGCTATCTT TCCAATGAAA TTTCTTACCG TGCCGTGCTG
CTGAGGGACC AGTTTGGCCT CAAATTACCC GTGGGCCATA TCCATACTCC CAAGGTTGCC
GGATATGACG CCGAAGCAGG GAAAGCCATA GCAGAGCAGG TGCGCGCCAT GGTAGAGCTT
GCCGCCGCAA CGCTGTAA
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| Protein sequence | MLKRMLPALF IAGLGTLPLL AQANLDVEEL RLPKANSDLG EVASRYQGLI DGLKDKLAAG
NEEKAVTQAM AYQGIRLWQQ AVRDVQAGHI DDRSLYWARL AMRTSLKQDK AGYAIVPWQR
DILVRAVETA SRGFSDIHFG DDVQIRILLT GFDPFFLDRN IGQSNPSGIT ALMLDGYKFK
VGGKQAQIET VMIPVRFADF DQGMIESLLT PFYRKRSIDA VFTVSMGRDD FDLERFPGRN
RSAEAPDNLN VLTGATKTQP IAPMLNGNSL NGDEFVEFSL PVTAMQAAPG NYKVNDNRKV
TTLGKGTFDA SSLAELQEAI SVEGSGGGYL SNEISYRAVL LRDQFGLKLP VGHIHTPKVA
GYDAEAGKAI AEQVRAMVEL AAATL
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