Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0574 |
Symbol | |
ID | 4602827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 715316 |
End bp | 716266 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779909 |
Product | glutathione synthetase |
Protein accession | YP_926452 |
Protein GI | 119773712 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR01380] glutathione synthetase, prokaryotic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000193905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.212613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAAC TCGGCATAGT GATGGACCCC ATCAGCGACA TCAACATCAA GAAAGACTCC AGCTTTGCCA TGCTGATGGC CGCCCAAAGT CGCGGCTATG AGCTGTTTTA TATGGAAATG CAGGACCTGG CCATGGTCAA GGGTGAGGCC CGCGCCCGCA TGCATCCCCT CAAGGTAATG CAGAACGCCG ATTGCTGGTT TGAATTGGGC GATGCAGTTG AGCAGCCGCT GGCCGAGCTT GATGTCATCC TGATGCGTAA AGACCCGCCA TTCGACACCG AATATATTTA CGCCACTTAT ATGTTGGAAC GCGCCGAAGA GGCGGGCGTG TTGATTGTCA ACAAGCCCCA GAGCCTGCGG GACGCCAACG AAAAGCTGTT TACCGCCTGG TTCAGCGAGT TTACTCCACT GACCATGGTC ACCCGCGATG CTGGCCGCAT CCGTGAGTTC CACGCCGAGC ATGGTGACAT TATCTTAAAG CCGCTGGATG GCATGGGCGG CGCCTCTATC TTTCGCGTCA AACAGGACGA CCCGAACCTT GGCGTCATCA TAGAAACCCT CACCAACCAC GGTAATTGCT ACGCCATGGC TCAGGTGTTT ATTCCTGAAA TCACCGCGGG CGACAAACGT ATTCTGGTGG TGGATGGTGA GCCAGTTCCA TATTGCCTGG CCCGTATCCC CAAGCAGGGT GAAACCCGGG GTAATCTTGC TGCCGGTGGC CGTGGAGTAG CACAGCCGCT GTCTGACGCC GACTGGCGCA TTGCCAAGGC TCTGGGGCCG GAACTCAAGC GCCGGGGTCT GATTTTTGTG GGTCTGGACG TGATTGGCGA TAAACTCACC GAAATCAACG TGACCAGCCC GACCTGTATC CGCGAAATCG AAGCGGCCTT CGACGTGGAT ATCACGGGCA TGCTGATGAA CGCCATCGAA GCCCGTATCA ACAAGAAATA A
|
Protein sequence | MIKLGIVMDP ISDINIKKDS SFAMLMAAQS RGYELFYMEM QDLAMVKGEA RARMHPLKVM QNADCWFELG DAVEQPLAEL DVILMRKDPP FDTEYIYATY MLERAEEAGV LIVNKPQSLR DANEKLFTAW FSEFTPLTMV TRDAGRIREF HAEHGDIILK PLDGMGGASI FRVKQDDPNL GVIIETLTNH GNCYAMAQVF IPEITAGDKR ILVVDGEPVP YCLARIPKQG ETRGNLAAGG RGVAQPLSDA DWRIAKALGP ELKRRGLIFV GLDVIGDKLT EINVTSPTCI REIEAAFDVD ITGMLMNAIE ARINKK
|
| |