| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0561 |
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| Symbol | |
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| ID | 4602814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 696656 |
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| End bp | 697687 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779896 |
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| Product | carbohydrate kinase |
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| Protein accession | YP_926439 |
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| Protein GI | 119773699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.335543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA GGGTGCTGTG TTTTGGGGAA GCCCTGATTG ATTTTCTATG TACCGGCAGC
GATGAGGACG ATGGCCTGAT GTTACCCTGT TATCGTCAGT ACCCGGGCGG CGCACCGGCC
AATGCTGCAG TGGCAGTGGC CAAACTCGGT GGCCAGGCAC GCTTTGCTGG TTTGGTGGGA
AAAGACACGT TCGGCGATTT CCTGGCCAAC TCGCTGGTGC GCTATGGCGT GGACATCAGC
CTGCTCGGGC GCCATAGCAG TGCCCCGACA TCACTCGCCT TCGTGCATTT GAATGATGAT
GGCGATCGCA GCTTCAGCTT CTACCGCGAT GGCGGCGCCG ACACCCTGTT TGATGCCAGC
GTCGCAGAGG CCAGTTGGTT TGAGAATACC GCTGTGTTGC ACCTGTGCAG CAATACCCTG
ACGACGGCCC AAAGTGCAGA GGCAACCCTG ACAATGGCCG ACAGAGCCGT TGCCGCTGGC
CTTGCCGTAA GTGTGGATGT GAACCTGCGC CACAACCTGT GGCAAGGCGG CGCCGCCTGC
AAAGCAACCG TGATGAGCTT GGTACACAAG GCCCACGTAC TTAAGTTCGC ACAGGAAGAA
CTTGAATATC TGGCAGGCAG CGAGCCACAA GGCTTTATCC AACAGCTGCT AGACTCCGGC
TGCAAGCTGC TGTTGATAAC AGATGGCGGC AATCCGATAC GCGCCTTTAC CGGTAAACAA
TGCCTGACCT TACCGGTGCC CAAAATGGAT GTGGTGGATA CCACCGCAGG GGGGGATGGT
TTTATTGGCG GCCTGCTGCA TCGCATTGCC CGGGATGGAT TGGATACCCT GCTTGAAAGC
GAGACCACCT TCAAAGACGC CCTCGGCTTT GCTATTGGCT GCGGCGCGCT GGCAGTAAGC
CGCCCGGGAG CCTTCCCGGC ACTGCCGGGA CTCGCCGAGG CCGAGGCGTT CCAGGCCTCA
ATGGGCGATG TACTCCACAC CATCAGCGTT GACGACTCAC GTTTACCCAA GCCTTGCCAA
CGCAGTTGGT AA
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| Protein sequence | MSKRVLCFGE ALIDFLCTGS DEDDGLMLPC YRQYPGGAPA NAAVAVAKLG GQARFAGLVG
KDTFGDFLAN SLVRYGVDIS LLGRHSSAPT SLAFVHLNDD GDRSFSFYRD GGADTLFDAS
VAEASWFENT AVLHLCSNTL TTAQSAEATL TMADRAVAAG LAVSVDVNLR HNLWQGGAAC
KATVMSLVHK AHVLKFAQEE LEYLAGSEPQ GFIQQLLDSG CKLLLITDGG NPIRAFTGKQ
CLTLPVPKMD VVDTTAGGDG FIGGLLHRIA RDGLDTLLES ETTFKDALGF AIGCGALAVS
RPGAFPALPG LAEAEAFQAS MGDVLHTISV DDSRLPKPCQ RSW
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