| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0541 |
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| Symbol | |
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| ID | 4602796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 666263 |
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| End bp | 668083 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779877 |
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| Product | serine/threonine protein kinase, putative |
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| Protein accession | YP_926421 |
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| Protein GI | 119773681 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.89559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00419942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGTCCGCCC AAACGCCACA GCTGCAACAC TTCTATATTT CTGAAGAACA ATCCATCTAC
CTGCTCAAGG CCGACGACGC CCGTAAGCAC AAGGCTTGGG TACGCCTGTG TAAACAGCAG
CTGTCCAAAT TGGGTTACCG GGACATAGAA TTTATTGGCA AGGGCGCCTA TGGCTTTGTG
TTTGCGGGCA TCAATGAGGC CAGCGAAGCC CACGTATTCA AGTTTTCCCG TATTACTCTG
CCCCAGCAAA TCCAGGACAG GCTCGAAGAA GAAGCCTTTA TGCTGTCACA CTGTCGCCAC
CCCAATGTGC CGCCGCTGGT CAAATTTGAA CGGGTCGGCA AACAGGGCAT TCTGGTGATG
GCTCGGGCAC CGGGTGAAGA GCTGGAGCAG CTGTGTCGTC GCCGCGGTGC TCTGCCTATT
CCCATGATCA TGAGCATTGC GCGCCAGCTG GCCGATTTGC TTGTTTATCT TAGAACGGGA
CGTCCGCTGG TCCATGGCGA CATCAAGCCC TCCAACCTGG TTTACGATGA AACCACAGGT
CATTTATCGC TGATTGACTG GGGCTCGGCC GTGTTTGCCC AGCGGGACGA ACTGGGCCGA
CCGGTGGAGG AACATGTAAT GAATCTGCTC TCCAGCGACC AGCAGCATAC CAATGCCCGC
ATGGGGGATG TGTATTTTAT CGGCGATGAG CAGCTCAGTG GCGCCCTCTC AAGCCCACGA
TTCGACGAGC AGGGAGTAGC CGCTACCCTC TATGCCCTGG CGTCTGGACA AGCCAGCCGT
TTTGGCTCCC GAGTTATTCC GCCCACCAGC ATTGGCCTGC CCATGGAGCT TGCCCGCACC
CTGGAGGCCA TGCTCAGTGA TGATGCCCAG ACCCGCAACC GGGGCGGTGA TTATTTTCTT
CGCAGTATGC GCCACAGTCA CCGGCTGCTG TTACCGGATA TCCCCCGCCC GGAAGCCATG
GCCGAGATCC CCGTGTGGGT ACAGAATCGG GGTAAAGAGG TCGATACCGT GAGCTACAGC
TCGCGCAAGT CCTTTTTGCG CGAGCACAAT GCCGATGAGC CCATCGCCCG GGTTGATGAT
GTGCAACTGG ATAAGTACTA CCGCAATTTT CTGGCCGGCA TGGGGGATAC CGAGAAGGGC
TTTATTGCCG CGGTGGGCAG ATTGGGGCAA TACCCCATAG TCGGGGGGCT CGCGCTCCAT
TGGCAGCAGG ATGGCGTATT TATCGACTCC AATCTGGCGC TGCACGACGC CACGCTCAAA
CAGGCATTGG TGCAGGCAGT AAACAACATG GTCACCCTCG CCCGGGGCAT AGGCCGTCTG
GGCACCTTCA AAGCCTGCTT TTTTAATGCG AGGGACACCT TGCACATCAG CCGCGATCCC
GTCAGCGGCA CCTTTGTGGC AAGCCCCGCT CAGCAGTTAC CCTTTGAAGT GGGCGATGTA
CCCATGTTGG AAGACAAGTC GCGGCTGCAT TCGTACTTTG AAGACGGCAA AGATCCGGAC
GAAAACCTGG AGCTACCCGC CGAAATCATG ACCGAGCTTG GCTGGCTAAA CCAAATCCAT
CACACCGGCT GTATCATCTT TGAGGCCCTT GGCGATCATT TGAAGATCCA CAGCTACTTA
AAGCTGCTTA ACCCGCGCAA GCAGGCCGCA TTCCGGGCGA GTCTCGACAG AATTTTGCAC
CATGTGGATA AGATTCACGG TAACGGAGTC TCTGGCTTTA TGAAGCTGCC CTACAAGAAC
ACCCGCAGGT TCGCCAAAAT CAGCACCAAA CCCGAGGCCT TTTATCCAAA AGATCCCAGG
CAGTTACATT CCGAAACCTG A
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| Protein sequence | MSAQTPQLQH FYISEEQSIY LLKADDARKH KAWVRLCKQQ LSKLGYRDIE FIGKGAYGFV
FAGINEASEA HVFKFSRITL PQQIQDRLEE EAFMLSHCRH PNVPPLVKFE RVGKQGILVM
ARAPGEELEQ LCRRRGALPI PMIMSIARQL ADLLVYLRTG RPLVHGDIKP SNLVYDETTG
HLSLIDWGSA VFAQRDELGR PVEEHVMNLL SSDQQHTNAR MGDVYFIGDE QLSGALSSPR
FDEQGVAATL YALASGQASR FGSRVIPPTS IGLPMELART LEAMLSDDAQ TRNRGGDYFL
RSMRHSHRLL LPDIPRPEAM AEIPVWVQNR GKEVDTVSYS SRKSFLREHN ADEPIARVDD
VQLDKYYRNF LAGMGDTEKG FIAAVGRLGQ YPIVGGLALH WQQDGVFIDS NLALHDATLK
QALVQAVNNM VTLARGIGRL GTFKACFFNA RDTLHISRDP VSGTFVASPA QQLPFEVGDV
PMLEDKSRLH SYFEDGKDPD ENLELPAEIM TELGWLNQIH HTGCIIFEAL GDHLKIHSYL
KLLNPRKQAA FRASLDRILH HVDKIHGNGV SGFMKLPYKN TRRFAKISTK PEAFYPKDPR
QLHSET
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