| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0531 |
|---|
| Symbol | |
|---|
| ID | 4602786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 654762 |
|---|
| End bp | 655235 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779867 |
|---|
| Product | YbaK/EbsC protein |
|---|
| Protein accession | YP_926411 |
|---|
| Protein GI | 119773671 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.969939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0653141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAG CAATTAAACA GGCCGAAAAA GCCGGGATCC CGTTTTCAGT GCTCGAATAT
GAGCACGATA GCCGTGCGCC ATCCTACGGT ATGGAGGCCG CCGATAAATT GGGGCTCGCC
CCCGAATTGG TCTTCAAAAC CCTGATGGTG GCGCTTGACG AAAAGTCTGC CCCCATCGCC
GTGGCCTTGG TGCCGGTAGC AAAGCAGCTG AACCTTAAAC TGGCTGCCAA GGCCCTGGGA
CAAAAGAAGT TGGTGATGGC AAACCCGACG GCCGCAGAGC GTTCCAGCGG TTATCTGCTG
GGGGGCATAA GTCCGCTGGG GCAGAAAAAG CCTTTGCCCA CTCTCATAGA TATCAGCGCT
GAGGCGTTGG CACAGATGCA TGTGAGCGCA GGTCGACGGG GGCTGGAGAT TGCCCTGGCA
CCCCAAAGCC TGGCTGGGCT TTGTCGGGGA GTTTTTGTCG CAATAACAGG CTGA
|
|---|
| Protein sequence | MTPAIKQAEK AGIPFSVLEY EHDSRAPSYG MEAADKLGLA PELVFKTLMV ALDEKSAPIA
VALVPVAKQL NLKLAAKALG QKKLVMANPT AAERSSGYLL GGISPLGQKK PLPTLIDISA
EALAQMHVSA GRRGLEIALA PQSLAGLCRG VFVAITG
|
|---|
| |