| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0527 |
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| Symbol | |
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| ID | 4602782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 650682 |
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| End bp | 651740 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779863 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_926407 |
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| Protein GI | 119773667 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3258] Cytochrome c |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000661478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.247272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG CACTGATGTT GATGCTGGGC GCCGCTGCGG TGACAGCCGC CCATGCACAG
TCCCCTGACA CCAGCCTGCC CGATCGCCAG GCACAGCTAC CCTCATCTCC AAAACTCGAG
GGCCAGGAAT ATCTCATCCC AAGACCACTG GACAGCATTC CTCAGGGTAC CTTTGGCGAT
AAAGTACGCC TCGGTTATCA GTTATTTGTG AATACCCAGC AGCTGCGGGG TAAGTATGTT
GGCAACGAGC TCAACTGCGT AAATTGCCAT ATGGATGCGG GCCGCAAACC CAATGCCTCG
CCAATCTGGG GGGCCTTTTT CGCCTATCCG GCGTACCGCA AGAAAAACGA CAAGGTCAAC
AGCTTTGAAG AGCGCATACA GGGCTGCTTT ACCTATTCCA TGAATGGCAA AGCACCACCT
TCCGGCAGTC CTGAACTGGT TGCCATGTCG GCCTATGCCT ATTGGCTGGG AATGGGTGGC
CTGATGGATC AATACGGTGT GGCCGGTGAG GTGCCTGAAC TGGCCGATGC CGAGCTGTTA
AAGGGCGGTA AACGCGAAGA TTTTCCAGCG CCAGATGCCA TCAAGACGGT ATTGACGGTG
GACGCCCGCG CCAACCTGCC CGGTCGTGGT TACCCTGCCA TTCCAAAACC TGAAATGCCA
TACGATCCCA GCCGTGGAGC CTTGGTGTAT CAGGCACACT GCCAATCCTG CCACGGCGCC
GACGGTCAGG GGCAGGCCAT GGCTGGCGTC TATGCCTTGC CGCCCCTGTG GGGACCGCAA
AGTTTTAACT GGGGAGCGGG CATGCACAGG GTCAACACGG CGGCTTTTTT CATCTCTGAA
AATATGCCGC TTGGAAAGAG TGTGCAGCTG ACACCTCAGC AGGCCTGGGA TGTGGCGGCC
TTTATCAACG CCAAGGAGCG TCCCCAGGAT CCTCGTTTCG AGGGCAATCT GGACGCAACC
AAGTCTCGCT ACCACAAGCA CGATGGTTAC TACGGCACGA GTCAGGATGG AGTCTTGCTT
GGCAAAGAGG CCTTCCCGGT GTTTCCTGCG GCAAAATAG
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| Protein sequence | MKPALMLMLG AAAVTAAHAQ SPDTSLPDRQ AQLPSSPKLE GQEYLIPRPL DSIPQGTFGD
KVRLGYQLFV NTQQLRGKYV GNELNCVNCH MDAGRKPNAS PIWGAFFAYP AYRKKNDKVN
SFEERIQGCF TYSMNGKAPP SGSPELVAMS AYAYWLGMGG LMDQYGVAGE VPELADAELL
KGGKREDFPA PDAIKTVLTV DARANLPGRG YPAIPKPEMP YDPSRGALVY QAHCQSCHGA
DGQGQAMAGV YALPPLWGPQ SFNWGAGMHR VNTAAFFISE NMPLGKSVQL TPQQAWDVAA
FINAKERPQD PRFEGNLDAT KSRYHKHDGY YGTSQDGVLL GKEAFPVFPA AK
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