| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0515 |
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| Symbol | |
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| ID | 4602770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 634698 |
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| End bp | 636065 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779851 |
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| Product | transporter, putative |
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| Protein accession | YP_926395 |
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| Protein GI | 119773655 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.97153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.615177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACA GCGGTCTTTC GGCCACCGAG AAAAAAGTCG CCTTTTCACT GGCCAGCGTA
TTCGGCCTGC GGATGATGGG TCTGTTTATG ATCATGCCGG TGTTTGCCCT TTACGGCCAA
CATCTCGAAG GTTTCTCGCC TCTGTGGGTG GGTATAGCCA TTGGTGCCTA TGGTTTAACC
CAGGCGCTGC TGCAAATCCC CATGGGTATT CTGTCGGACA AATTTGGCCG CAAGCCAATT
ATTCTTATCG GCTTGTTGGT GTTTGCCGTG GGCAGTGTGG TCGCCGCCAT GGCCGACAGC
ATCTATGGGG TAGTCTTCGG CCGGGCATTG CAGGGCATGG GGGCCATTGC CGCCGCAGTG
CTGGCGCTGG CCGCCGATCT GACCCGTGAC GAGCAGCGCA CCAAGGTCAT GGCCATTATC
GGCATGTGTA TTGGTTTCTC ATTTGCGCTG TCATTGCTGG TGGGCCCGGT GGTGGCGCAG
CATATGGGGC TTTCGGGGCT CTTTGCCCTC ACTGCGGGTT TGGCGCTCTT GGGCATCTTG
ATAGTGCAAC TGCTGGTACC AAACCCAGTG CATCAGGCGC CCAAGGGCGA TACGCTGGCG
GCGCCTGCCA AACTGATGCG GATGCTCAAA GACCCGCAGC TGTTCCGCCT CGATGCCGGT
ATCTTTATTT TGCACCTGGT GCTGACGGCC GTATTTGTGG CATTGCCGCT GGATTTGGTG
GATGCAGGTC TTGCCAAAGA AAAGCACTGG ATGCTGTACT TCCCCGCTTT TATCGGTGCC
TTTTTCTTGA TGGTGCCGCT TATCATCATC GGCGTGAAGC GTAAGAACAC CAAGGGCATG
TTCCAGGTGG CACTGGTGAT CATGATGCTG GCCCTCGCTG TGATGGCGCT GTTTGCCGAT
AATCTGTGGC TGCTGGCCTT TGCGGTGTTG CTGTTTTTTA CCGGTTTTAA CTACCTTGAA
GCCTCGCTGC CCAGCCTGAT TGCCAAGTTT TGCCCCGTGG GTGAAAAGGG CTCGGCCATG
GGCGTGTATT CCACCAGTCA GTTCCTCGGT GCCTTCTGCG GTGGTCTTTT GGGCGGCGGC
GCCTTCCAAT TGCTGGGGGC GGCGGGTGTG TTCGTCGCGG CGCTCGGTTT GATGGCGCTT
TGGCTGGTGC TTTCTCTGGG GATGAAGAAC CCTGTGCTGC TCAAGAGCTA CACCCTGGAA
GCGCAGGTAG AAGGCAGGGA ACAGGCCCGT GAAATGGCCA GCAGGCTGTC GCAATTGGCC
GGTGTAGCCG AAGCCATTGT GGTGCTTGAA GAAAAAGTTG CTTACCTCAA AGTGGATGAG
CAATTCGATT TAAGAGAAGC CAGAGCTGTG TTAGGCTCTG CAAATTAA
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| Protein sequence | MANSGLSATE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLEGFSPLWV GIAIGAYGLT
QALLQIPMGI LSDKFGRKPI ILIGLLVFAV GSVVAAMADS IYGVVFGRAL QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGFSFAL SLLVGPVVAQ HMGLSGLFAL TAGLALLGIL
IVQLLVPNPV HQAPKGDTLA APAKLMRMLK DPQLFRLDAG IFILHLVLTA VFVALPLDLV
DAGLAKEKHW MLYFPAFIGA FFLMVPLIII GVKRKNTKGM FQVALVIMML ALAVMALFAD
NLWLLAFAVL LFFTGFNYLE ASLPSLIAKF CPVGEKGSAM GVYSTSQFLG AFCGGLLGGG
AFQLLGAAGV FVAALGLMAL WLVLSLGMKN PVLLKSYTLE AQVEGREQAR EMASRLSQLA
GVAEAIVVLE EKVAYLKVDE QFDLREARAV LGSAN
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