| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0479 |
|---|
| Symbol | |
|---|
| ID | 4602734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 589935 |
|---|
| End bp | 591062 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779815 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926359 |
|---|
| Protein GI | 119773619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.168605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC TGCTGCGCCG TGAGCTTGGT GCACTGTGGC AAAACCCCTG GCAACTGGCG
CTGGTAAGTT ACCTGCCCAT TCTTGCCATG TTGGCACTTT GGTGGCTCTT CAGTGCCGCC
TTGCCGAGGC AGCTGCCAGT CGCCATGGTG GATCTTGATA ACAGCAGCCT GAGCCGTGAA
CTGGGTCGGC ATATAGCCGC AAGCCCTGTC ATCAGTCCCA TCTCTTTCGC GTCATTGCCA
CAGGCCGAGG ACGCCATGAA CCGGGCCGAG GTCTATGCTC TGGTGGTGGT ACCCCACGGG
TTTTCCCGCG ATCTGAAAAC TGGTGCTCAG CCCACGGTGG ATGTGCGATA CAACGGCCAG
TTTTTATTGG TGGGCAAACT GCTTGCCGCC AATTTGCAGC AAGCCATCGC CGATGCCATG
AAGCCTCTGG CCTACAGCAA GCAGCTGGCT CATGGCGCCA ATCCTCATCA GGCGCACATC
AATATTGCCC CCATCGCCAC CCAAACCACG GCGCTCTTTA ACCGGAACAA CAACTATGTG
GGCTTTTTGG TGCCGCCGGT GTTGATTGCA CTGTGGCAGC TCACGGCCAT GTTGGTGTTT
GCCAACGCCC TCAACCGCGA GTTGGAACCC TCGGCGCGGT GCGATTCTGT GGGCTTGCTG
CCCAGGCTGG GCGCCAAGTT ACTCTGCTAT ATGCCGCTGT TGATGTTGCA GGGGCTGTTT
ATCCATGCGC TGTTGTTTGG CTACTTAAAA CTGCCGGTGG CTGCTTCGCC ACTGTGGCTC
ATTCCTGCCA TGCTGGCCCT GTTGCTTGCA GTATTTTTGA TAGTGGCGGT GATATTTTTG
CTGATGCAGG AGTCTGCCCG TGTCGTCAGT TTTTGCACCG CGCTCTTTGC TCCGGCGTTT
GCCTTCATGG GAGTGACCTT TCCGGTTCAG GATATGCCGG CAGCGGCGCA GTATTGGCGT
CTGCTGATGC CATCGAGCCA CTATATCGAC TCCCATATTG CTCTGGTGAG TTATGGCGTA
AGCGGCATGG AGTTACTGGG TAAGAGTTTC ACTTTTATGC CGTTTCTGCT GCTTCTGTTG
CCCATTGCGC TGCTGGCACG CAAGGGGCTT AAGGAGGCGC AGTCATGA
|
|---|
| Protein sequence | MKTLLRRELG ALWQNPWQLA LVSYLPILAM LALWWLFSAA LPRQLPVAMV DLDNSSLSRE
LGRHIAASPV ISPISFASLP QAEDAMNRAE VYALVVVPHG FSRDLKTGAQ PTVDVRYNGQ
FLLVGKLLAA NLQQAIADAM KPLAYSKQLA HGANPHQAHI NIAPIATQTT ALFNRNNNYV
GFLVPPVLIA LWQLTAMLVF ANALNRELEP SARCDSVGLL PRLGAKLLCY MPLLMLQGLF
IHALLFGYLK LPVAASPLWL IPAMLALLLA VFLIVAVIFL LMQESARVVS FCTALFAPAF
AFMGVTFPVQ DMPAAAQYWR LLMPSSHYID SHIALVSYGV SGMELLGKSF TFMPFLLLLL
PIALLARKGL KEAQS
|
|---|
| |