| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0417 |
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| Symbol | |
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| ID | 4602672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 513399 |
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| End bp | 514343 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779753 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_926297 |
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| Protein GI | 119773557 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0769316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCT ATCGCACCCA ACTGCCACAA CTTGATGGCG GCGTATTCCT CACCGATGGT
GGTATCGAGA CCACCCTGAT ATTCCATGAA GGGTTTGAAC TGCCTTACTT TGCAGCCTTC
GAGCTGCTGA AAACTCCCCA GGGGCGAGAT GCCTTAACTC ACTACTTTGT GACCTACGTG
AAATTGGCCG GATTATTTGA CACCGGTTTT ATTCTCGAAA GCCCAACCTG GCGTGCCAGC
AGTGATTGGG GGGCGCTATT GGGTTACACG AAAGAGACCC TGGCCCAGGC GAACCGTGAG
GCGATAGCGC TGCTTGAAGT CATACGTGAG GCACATTCTG GGCGTCTGCC TGTCGTCGTC
AGTGGTTGTA TCGGCCCCCG TTTTGACGGC TATCTGCCAG ACAAAAGCAT GACGGCAGAG
GACGCCAGGC ATTACCACAG CATCCAGATT GAGACCCTCG CCTCCACCTC TGCTGACATG
ATCTGTGCTT TGACCCTGAA TCGTGTTGAA GAAGCCATCG GCATAGTGGA AGCCGCGAGG
GAAGCGGCCA TGCCCGTGGT GATTTCATTC ACCCTCGAGA CTGACGGCCG CTTACCCACA
GGGCAAAGTC TGGGTGATGC CGTGGTGCAG GTGGATGAAG CCACCGCAGG CTATGCCGCG
TATTTTATGA TTAATTGCGC CCATCCGAGT CATCTGGAGA CAGTGCCACA AGATGCGCCC
TGGCTTGCAA GGGTGAAAGG ATTTCGCGCC AACGCATCGT CCCTAAGCCA CGCCGAGCTA
AACGACGCCA CGACTCTGGA CGATGGAGAT CCCCATCAGT TGGGGCAGCA GTATGCGAGC
TTGATGTCGA CCAGGCTTAA GGGACTGAAT GTGCTGGGAG GTTGCTGTGG TACAGATCAT
CGTCATTTGG AACAGATAGC CAAGGCATGC ATTAAGCCAA GATGA
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| Protein sequence | MGIYRTQLPQ LDGGVFLTDG GIETTLIFHE GFELPYFAAF ELLKTPQGRD ALTHYFVTYV
KLAGLFDTGF ILESPTWRAS SDWGALLGYT KETLAQANRE AIALLEVIRE AHSGRLPVVV
SGCIGPRFDG YLPDKSMTAE DARHYHSIQI ETLASTSADM ICALTLNRVE EAIGIVEAAR
EAAMPVVISF TLETDGRLPT GQSLGDAVVQ VDEATAGYAA YFMINCAHPS HLETVPQDAP
WLARVKGFRA NASSLSHAEL NDATTLDDGD PHQLGQQYAS LMSTRLKGLN VLGGCCGTDH
RHLEQIAKAC IKPR
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