| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0416 |
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| Symbol | |
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| ID | 4602671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 512137 |
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| End bp | 513069 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779752 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_926296 |
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| Protein GI | 119773556 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00860785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTAG CAGTGAACGA AGACCTGATC GTGATGGCGA TTTGGGGACT TATCTTCTTT
ATCTTTATTA TCAAGCTGTT CCAGTCTATT CGTCTGGTGC CAACCAAGTC GGCATATATA
GTCGAGCGAC TGGGCAAATA CCATTCAACT CTGGATGCGG GCTTTCACGC CTTGATCCCC
TTTGTGGATA AAGTTGCCTA TGTTCATGAT CTGAAAGAGG AGACTATCGA CGTGCCACCG
CAGGAGTGTT TCTCCAGTGA TGAGGTCAAG GTCGAAGTCG ATGGTGTTAT CTATATTTCG
GTGGTGGATC CGGTGAAAGC GAGCTATGGC GTGACCGACT ATCGCTATGC GGCTATTCAG
TTGGCCCAAA CCACCACCCG CTCTGTCATT GGTACTCTGG AGTTGGACCG TACCTTTGAA
GAGCGTGACG TTATAAGTGC CAAGGTAGTT GAAGTGCTGG ATCAGGCAGG TGCTCTCTGG
GGTATCCGCG TGCATCGTTA TGAAATTAAA AATATCCAGC CACCTGAAAC CGTGAAAAAC
GCCATGGAAA TGCAGGTGAA CGCAGAACGT GAGCGCAGGG CCTTGCTGGC AAAGAGTGAG
GGTGACAAAC AGGCCAAGAT TAACCGCTCT GAAGGTATCA AGGCCGAAAC TATCAACCGT
TCTGAGGGTG AGATGCAAAA ACGCATCAAC GAAGCAGAAG GTAAGGCCGA AGAAATCCTC
GCCATCGCCA GGGCCACTGC AGAGTCCATT GAACGCCTGG CCGAAGTGAT TTCCGCTCCC
GGTGGCCAGA ATGCCCTGCG TTTACAACTG GGTGAGCAGT ACCTGACGCA GCTTAAAGGC
CTGGGACAGC AGGGCAGCCG TGTTGTGGTA CCCGCCAATA TGGTGAACTT TGATCAGTGG
ATGGACGCCA TGGGCTTGAA AGAGCAGCGT TAA
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| Protein sequence | MQLAVNEDLI VMAIWGLIFF IFIIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHALIP
FVDKVAYVHD LKEETIDVPP QECFSSDEVK VEVDGVIYIS VVDPVKASYG VTDYRYAAIQ
LAQTTTRSVI GTLELDRTFE ERDVISAKVV EVLDQAGALW GIRVHRYEIK NIQPPETVKN
AMEMQVNAER ERRALLAKSE GDKQAKINRS EGIKAETINR SEGEMQKRIN EAEGKAEEIL
AIARATAESI ERLAEVISAP GGQNALRLQL GEQYLTQLKG LGQQGSRVVV PANMVNFDQW
MDAMGLKEQR
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