| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0415 |
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| Symbol | |
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| ID | 4602670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 511210 |
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| End bp | 512124 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779751 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_926295 |
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| Protein GI | 119773555 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00776532 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTGT TAACCATAGC TTTTCTTTTT ATTCTTTTCA TTTTGTACAA GTTGATGCTC
ATCGTTCAAA TGCGGGAAGT GGCCGTGATT GAGCGTCTCG GTAAATTTCG CACTGTGCTG
GAGCCGGGGT TTCACTTCCT GATCCCCTTT GTCGATCGGG TTGCATACCG CCATGACACC
CGTGAGCAAG TGTTGGATGT ACCGGCCCAA AGCTGTATCT CCAAGGACAA TACCCAGCTG
GAGGTTGATG GTCTGGTGTA TCTCAAGGTG ATGGACGGCA AGCTGGCGAG CTACGGGATT
GAAGATTATC GCCTTGCCGC GGTAAACCTG GCTCAAACCA CCATGAGATC GGAAATTGGT
AAGCTCACCC TGAGCGAAAC CTTTTCTGAG CGTGACCGCC TGAACGAGTC CATAGTGCGC
GAAATCGATA AGGCCTCTGA GCCTTGGGGC ATCAAGGTGT TGCGCTACGA GATTAAAAAC
ATCACACCTT CAAGGCATGT GATCCACACC CTTGAGAAAC AGATGGAAGC CGAGCGTCGC
AAGCGCGCCG AGATTACTCT GGCCAATGCC GAAAAGGCGG CGATGATCAA CCTCTCAGAA
GGTGAGCGCC AGGAAGCTAT TAACCTTTCG GAAGGGGAAA AACAGAAGCG TATCAACGAG
GCCAAGGGCA CAGCGGCTGA AATCGCCATC ATCGCCCGCG CCAAAGCCGA GGGCATGGGC
ATGGTATCCA GTGCGCTGGC GGTGCAGGGC GGAACCAAAG CCATGAATAT GCAGCTCAAA
GAGCAGTTTA TTAAACAGAT AGGCGAAGTG ATGAAGAATG CCGAAGTCTC TGTGGTGCCG
GCGGAGCTGG CGAAGATGGA AGGCTTTTTC GAAGGCATGG ACAAAGTCAG CCATGCGCTG
ACTGGTAAGG TATAA
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| Protein sequence | MLLLTIAFLF ILFILYKLML IVQMREVAVI ERLGKFRTVL EPGFHFLIPF VDRVAYRHDT
REQVLDVPAQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI EDYRLAAVNL AQTTMRSEIG
KLTLSETFSE RDRLNESIVR EIDKASEPWG IKVLRYEIKN ITPSRHVIHT LEKQMEAERR
KRAEITLANA EKAAMINLSE GERQEAINLS EGEKQKRINE AKGTAAEIAI IARAKAEGMG
MVSSALAVQG GTKAMNMQLK EQFIKQIGEV MKNAEVSVVP AELAKMEGFF EGMDKVSHAL
TGKV
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