Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0397 |
Symbol | |
ID | 4602652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 493621 |
End bp | 495093 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639779733 |
Product | hypothetical protein |
Protein accession | YP_926277 |
Protein GI | 119773537 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA ACAACTTTCT TCACCTGTTT TTGGAGTCAG CCCCCTGGCT GCTGCTGGGG CTGTTTCTGG CGGGCATGCT GAAAATGTTT GTGCCCATGG CGTGGATGCA AAAGCAGCTC GGTGGACATG GTTTTAAGGC CACGGTTAAG GCTGCGCTCT TGGGCGCGCC CTTGCCGCTG TGTTCCTGCG GGGTGATTCC AGCCGCAGTG GGCCTTCGGC GCAGCGGCGC TTCCAAGGCG GCCACTACCT CGTTTTTGGT GTCTACTCCT GAGACTGGCG TGGATTCTGT GACTGTATCC TACGTGCTGC TTGGCCCCTT TATGGCGATA GTGCGGCCGA TTGCCGCTGT GACCAGCGCC ATAGTGGCAG GGCTGCTGGT AGGCCGCGAT GAGGATACGC CGGATAATGC ATCCCAATCC GCTGAAACAT CGTCTGATAA GCAGTCTGAT AAGCCAATAA CCCAGGCCGC CAAGCCCGCC ATGAGCTTCA AACCGGTTGC TGCAAACAGC CCGCTGATGA CCCCTACCGG CGCCAAACTT GCAGCCGCCC CAGCGGTGAG CTTCAAGCCA GTTGCCGAAA ACACTGGCAG AAGCTGCTGC TCAGGTAACG CCGAAGCTGA GCCAAAGCCC GAATCCAAGC CCCAGCCCAA GTCCGAACTC AGGCAAGAGT CTTGCTGCGC GCCGAAGGCG GTTGCGGCTT CTTGCTGCGA TACTAATGCT TCCTGCTGCG ATGCCAAGCC CGCCGCTGAA ACGGCCTCTT GTTGCAGCCC CAAGGTCGTA GTGCCCGAGG CCTCAAGCTG TTGCGCTGCT TCATCTACAT CCGCATCCAC GGCTACATCG GCCGATACAG GCTGCTGTGG CAGCACGGAA CAAGATGCTC GCCCAGCGAA CCAGCCCGCC TCTGTGATTG AGCGGATTTG GGATGGCCTT GTGTATGCCT CAACCGACCT GGTGCGCGAT ACCGCCATCT GGCTGCTGAT AGGTCTTTTC TTTGCCGCCT TGGTACAAAC CTATGTACCG GCAGACTTTC TAGCGCAGTG GGGCAACGGT ATCCTCGCCA TGTTGGTGAT GGTGCTGGTG TCCATTCCCA TGTATATCTG CGCTACAGCT TCGACCCCCA TTGCCGCTGG TTTGCTGCTG GCCGGGGTGT CACCCGGCGC CGTACTGGTG TTTATGATGG CAGGCCCTGC CACCAATATC GCCACGCTCG GAGTCGTAAC CAAGGAGCTG GGTAAGCGGG CACTGTTTGG CTACCTCGGT GGTGTGCTTG GGGTGGCTTT GGTGTTTGGC GTGCTGGTGA ATTATCTGGT TGCCACTTTC GGCTTCGAAG TGGCGCCGCA GATTGGTGAA GAGCATGCCA TGCTGCCCGA CTGGTTGGTG GCCTCATCCG GGCTGCTGCT GGCTTTCCTG ATGGGTCGGG TGCTGTGGCA AAAGCTGCCA CGCAAACAAA AAACCGGCGG TTGCTGCAGC TAA
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Protein sequence | MLLNNFLHLF LESAPWLLLG LFLAGMLKMF VPMAWMQKQL GGHGFKATVK AALLGAPLPL CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSVTVS YVLLGPFMAI VRPIAAVTSA IVAGLLVGRD EDTPDNASQS AETSSDKQSD KPITQAAKPA MSFKPVAANS PLMTPTGAKL AAAPAVSFKP VAENTGRSCC SGNAEAEPKP ESKPQPKSEL RQESCCAPKA VAASCCDTNA SCCDAKPAAE TASCCSPKVV VPEASSCCAA SSTSASTATS ADTGCCGSTE QDARPANQPA SVIERIWDGL VYASTDLVRD TAIWLLIGLF FAALVQTYVP ADFLAQWGNG ILAMLVMVLV SIPMYICATA STPIAAGLLL AGVSPGAVLV FMMAGPATNI ATLGVVTKEL GKRALFGYLG GVLGVALVFG VLVNYLVATF GFEVAPQIGE EHAMLPDWLV ASSGLLLAFL MGRVLWQKLP RKQKTGGCCS
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